RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, human

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP40-206	ENST00000483546	EDDM3B	P56851	147 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	RBM11	P57052	281 aa	Known RBP	12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	FABP5	Q01469	135 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	SLC22A6	Q4U2R8	563 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	C1orf100	Q5SVJ3	147 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	TMEM200B	Q69YZ2	307 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	GLIPR1L1	Q6UWM5	242 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	VMO1	Q7Z5L0	202 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	OR4S1	Q8NGB4	309 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	CST11	Q9H112	138 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	ZNF69	Q9UC07	566 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	ST3GAL6	Q9Y274	331 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	LINC00312	Q9Y6C7	94 aa		12.83	□□□□□ -0.36
RPP40-206	ENST00000483546	SVEP1	Q4LDE5	3571 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	IGHV1-69D	A0A0B4J2H0	117 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	CENPVL3	A0A0U1RRI6	287 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A10P	A6NDY2	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A18P	A6NE21	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A16P	A6NEW6	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A20P	A6NIJ5	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A8P	A6NJQ4	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A7P	A6NKC0	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A22P	A8MWA6	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A12P	A8MX19	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A5P	A8MXJ8	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A23P	A8MXZ1	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	IGHV1-69	P01742	117 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A15P	P0C7V4	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A13P	P0C7W8	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A14P	P0C7W9	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	FAM90A24P	P0C7X0	464 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	P2RX3	P56373	397 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	PAX5	Q02548	391 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	SYT6	Q5T7P8	510 aa	Predicted RBP	12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	RBMS3	Q6XE24	437 aa	Known RBP	12.82	□□□□□ -0.36
RPP40-206	ENST00000483546		Q8N7P7	452 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	OR4D6	Q8NGJ1	314 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	OR6M1	Q8NGM8	313 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	OR10K1	Q8NGX5	313 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	CHST6	Q9GZX3	395 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	PPIL3	Q9H2H8	161 aa	Known RBP	12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	NCOR1P1	Q9H4R4	102 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	SPACA1	Q9HBV2	294 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	VCX3A	Q9NNX9	186 aa		12.82	□□□□□ -0.36
RPP40-206	ENST00000483546	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.82	□□□□□ -0.36
RPP40-206	ENST00000483546		A0A087WXM4	84 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	TRAV1-2	A0A0B4J238	106 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	C17orf98	A8MV24	154 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	ZNF728	P0DKX0	622 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	CALR	P27797	417 aa	Known RBP	12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	HILS1	P60008	231 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	SCN1B	Q07699	218 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	EDDM3A	Q14507	147 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	PIGY	Q3MUY2	71 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	OR4M1	Q8NGD0	313 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	LHX4	Q969G2	390 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	C1orf147	Q96MC9	270 aa	Predicted RBP	12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	ZNF714	Q96N38	554 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	NR1H4	Q96RI1	486 aa	Predicted RBP	12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	NKX3-1	Q99801	234 aa	Predicted RBP	12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	PPA2	Q9H2U2	334 aa		12.81	□□□□□ -0.36
RPP40-206	ENST00000483546	PDCD5	O14737	125 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	SLC22A1	O15245	554 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	OR7C1	O76099	320 aa	Predicted RBP	12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	MYL9	P24844	172 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	HTR2C	P28335	458 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	FGF9	P31371	208 aa	Predicted RBP	12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	UBE2E1	P51965	193 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	ERVFRD-1	P60508	538 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	ZNF273	Q14593	569 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	PAN3	Q58A45	887 aa	Known RBP	12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	ZFAND2B	Q8WV99	257 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	CORO2A	Q92828	525 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	TNFRSF14	Q92956	283 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	SLC6A7	Q99884	636 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	BARHL1	Q9BZE3	327 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	ZNF696	Q9H7X3	374 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	HEXA-AS1	Q9H8Q6	139 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	ZMAT3	Q9HA38	289 aa	Known RBP	12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	SIRT7	Q9NRC8	400 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	STUB1	Q9UNE7	303 aa		12.8	□□□□□ -0.36
RPP40-206	ENST00000483546	TRGV10	A0A0A0MS01	117 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	TRAV24	A0A0B4J272	114 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	SLC17A2	O00624	439 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	GEMIN2	O14893	280 aa	Known RBP	12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	BPNT1	O95861	308 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	MGMT	P16455	207 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	DLX6	P56179	175 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	KRBOX4	Q5JUW0	171 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	C11orf42	Q8N5U0	333 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	TSPAN14	Q8NG11	270 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	KCNG3	Q8TAE7	436 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	GAL3ST2	Q9H3Q3	398 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	PRDM13	Q9H4Q3	707 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	TAS2R3	Q9NYW6	316 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	OR6C3	Q9NZP0	311 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	KIAA2026	Q5HYC2	2103 aa		12.79	□□□□□ -0.36
RPP40-206	ENST00000483546	IGHV3OR16-10	A0A075B7F0	116 aa		12.78	□□□□□ -0.36
RPP40-206	ENST00000483546	ODAM	A1E959	279 aa		12.78	□□□□□ -0.36
RPP40-206	ENST00000483546	RNASEK-C17orf49	H0YIS7	233 aa		12.78	□□□□□ -0.36

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