RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 BUB1B-PAK6H3BSN5 160 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 CLIC3O95833 236 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 SERPINA3P01011 423 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 ZNF44P15621 663 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 ZNF20P17024 532 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 ATF1P18846 271 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 ZNF85Q03923 595 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 EGFEM1PQ0D2K5 195 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 SPIN3Q5JUX0 258 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 C8orf86Q6ZUL3 223 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 OSR2Q8N2R0 312 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 OR56B4Q8NH76 319 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 ZNF596Q8TC21 504 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 NEK6Q9HC98 313 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 S100A14Q9HCY8 104 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 WARS2Q9UGM6 360 aaKnown RBP11.03□□□□□ -0.64
VARS-226ENST00000483275 HHLA2Q9UM44 414 aa11.03□□□□□ -0.64
VARS-226ENST00000483275 NUDT19A8MXV4 375 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 H3BNX3 289 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 LY6LH3BQJ8 138 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 TOR1AO14656 332 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 SH2D1BO14796 132 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 CYB5AP00167 134 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 SNRNP70P08621 437 aaKnown RBP11.02□□□□□ -0.65
VARS-226ENST00000483275 OR2T7P0C7T2 308 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 UBCP0CG48 685 aaKnown RBP11.02□□□□□ -0.65
VARS-226ENST00000483275 ERP29P30040 261 aaKnown RBP11.02□□□□□ -0.65
VARS-226ENST00000483275 HTR1FP30939 366 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 PTGFRP43088 359 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 GLP1RP43220 463 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 NANOS3P60323 173 aaKnown RBP11.02□□□□□ -0.65
VARS-226ENST00000483275 PDZK1IP1Q13113 114 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 DIAPH2-AS1Q14236 149 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 LTC4SQ16873 150 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 C17orf58Q2M2W7 97 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 KRBOX4Q5JUW0 171 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 OR2W3Q7Z3T1 314 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 FAM220AQ7Z4H9 259 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 OR13C9Q8NGT0 318 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 PP6455Q8WZ26 134 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 OPALINQ96PE5 141 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 C9orf16Q9BUW7 83 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 MOB4Q9Y3A3 225 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 HSPE1-MOB4S4R3N1 261 aa11.02□□□□□ -0.65
VARS-226ENST00000483275 H3BUI4 141 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 SLC33A1O00400 549 aaPredicted RBP11.01□□□□□ -0.65
VARS-226ENST00000483275 BAG2O95816 211 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 CD34P28906 385 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 ATP6V1E1P36543 226 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 GNG10P50151 68 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 ARHGDIBP52566 201 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 CDC42P60953 191 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 ISL1P61371 349 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 RPL23AP62750 156 aaKnown RBP11.01□□□□□ -0.65
VARS-226ENST00000483275 HNF4GQ14541 408 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 LPCAT4Q643R3 524 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 OR52W1Q6IF63 320 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 Q6P435 159 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 LHFPL2Q6ZUX7 228 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 RTN4RL2Q86UN3 420 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 DRAM1Q8N682 238 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 KLHL30-AS1Q8NEE0 82 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 DNAAF1Q8NEP3 725 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 OR4D6Q8NGJ1 314 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 OR2G2Q8NGZ5 317 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 TOMM40LQ969M1 308 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 EME1Q96AY2 570 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 RBMXL1Q96E39 390 aaKnown RBP11.01□□□□□ -0.65
VARS-226ENST00000483275 KIRREL1Q96J84 757 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 B9D2Q9BPU9 175 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 GABARAPL3Q9BY60 117 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 GLS2Q9UI32 602 aa11.01□□□□□ -0.65
VARS-226ENST00000483275 TRAV39A0A0B4J263 110 aa11□□□□□ -0.65
VARS-226ENST00000483275 E9PQ18 207 aa11□□□□□ -0.65
VARS-226ENST00000483275 EI24O14681 340 aa11□□□□□ -0.65
VARS-226ENST00000483275 SULT1C4O75897 302 aa11□□□□□ -0.65
VARS-226ENST00000483275 KDM4BO94953 1096 aa11□□□□□ -0.65
VARS-226ENST00000483275 OCM2P0CE71 109 aa11□□□□□ -0.65
VARS-226ENST00000483275 OCMP0CE72 109 aaPredicted RBP11□□□□□ -0.65
VARS-226ENST00000483275 PRKACBP22694 351 aa11□□□□□ -0.65
VARS-226ENST00000483275 CEACAM3P40198 252 aa11□□□□□ -0.65
VARS-226ENST00000483275 THBS3P49746 956 aa11□□□□□ -0.65
VARS-226ENST00000483275 ALDH3A2P51648 485 aa11□□□□□ -0.65
VARS-226ENST00000483275 RAB25P57735 213 aa11□□□□□ -0.65
VARS-226ENST00000483275 HES1Q14469 280 aa11□□□□□ -0.65
VARS-226ENST00000483275 DEFB136Q30KP8 78 aa11□□□□□ -0.65
VARS-226ENST00000483275 LCNL1Q6ZST4 164 aa11□□□□□ -0.65
VARS-226ENST00000483275 PQLC1Q8N2U9 271 aa11□□□□□ -0.65
VARS-226ENST00000483275 OR13A1Q8NGR1 328 aa11□□□□□ -0.65
VARS-226ENST00000483275 OR13C3Q8NGS6 347 aa11□□□□□ -0.65
VARS-226ENST00000483275 TFAP2CQ92754 450 aa11□□□□□ -0.65
VARS-226ENST00000483275 DPF1Q92782 380 aa11□□□□□ -0.65
VARS-226ENST00000483275 CORO2AQ92828 525 aa11□□□□□ -0.65
VARS-226ENST00000483275 RPEQ96AT9 228 aa11□□□□□ -0.65
VARS-226ENST00000483275 COMMD4Q9H0A8 199 aa11□□□□□ -0.65
VARS-226ENST00000483275 SEBOXQ9HB31 216 aaPredicted RBP11□□□□□ -0.65
VARS-226ENST00000483275 IMPAD1Q9NX62 359 aa11□□□□□ -0.65
VARS-226ENST00000483275 TAS2R3Q9NYW6 316 aa11□□□□□ -0.65
VARS-226ENST00000483275 FRRS1LQ9P0K9 344 aa11□□□□□ -0.65
VARS-226ENST00000483275 ZNF581Q9P0T4 197 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms