RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 DDX18Q9NVP1 670 aaKnown RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 PISDQ9UG56 409 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 KIF26AQ9ULI4 1882 aaPredicted RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 STARD10Q9Y365 291 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 MMACHCQ9Y4U1 282 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 AP4S1Q9Y587 144 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 GMEB1Q9Y692 573 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 REV3LO60673 3130 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 CHD5Q8TDI0 1954 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 TECTAO75443 2155 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 HELZP42694 1942 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 TICRRQ7Z2Z1 1910 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 IGLV3-12A0A075B6K2 115 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 IGKV3D-11A0A0A0MRZ8 115 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 SPAARA0A1B0GVQ0 90 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 TCRBV3S1A0A5B6 114 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 DHRS12A0PJE2 317 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 C9J4A7 227 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 F6UB75 175 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 UPK1AO00322 258 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 HMGN4O00479 90 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 SNX4O95219 450 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 PSMG1O95456 288 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ATP6V1G2O95670 118 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ZNF682O95780 498 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 SERPINA1P01009 418 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 HMGN2P05204 90 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 IFI6P09912 130 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 CT62P0C5K7 136 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 GGT1P19440 569 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 CSRP1P21291 193 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 KDELR2P33947 212 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 GABRA3P34903 492 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 CDKN1BP46527 198 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 EMP2P54851 167 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 DSTNP60981 165 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 NUTF2P61970 127 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 ACTA2P62736 377 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ACTG2P63267 376 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ACTC1P68032 377 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 CDK6Q00534 326 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 FADDQ13158 208 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 EIF3IQ13347 325 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 GNA13Q14344 377 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 RCN1Q15293 331 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ZNHIT3Q15649 155 aaPredicted RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 SNCBQ16143 134 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 DEFB116Q30KQ4 102 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 TRMT12Q53H54 448 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 HES3Q5TGS1 186 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 LCN8Q6JVE9 175 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 REEP3Q6NUK4 255 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ZFP1Q6P2D0 407 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ZNF836Q6ZNA1 936 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 DGAT2L6Q6ZPD8 337 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ZNF493Q6ZR52 646 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 SHISA6Q6ZSJ9 500 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ASCL5Q7RTU5 278 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 SLC30A8Q8IWU4 369 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 SAXO1Q8IYX7 474 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ST13P4Q8IZP2 240 aaPredicted RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 C10orf111Q8N326 155 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 MS4A15Q8N5U1 240 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 Q8N976 141 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 PLPP5Q8NEB5 264 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 OR7G1Q8NGA0 311 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 OR52R1Q8NGF1 315 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 OR56B2PQ8NGI1 322 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ZNF675Q8TD23 568 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 PYDC1Q8WXC3 89 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 RAB8BQ92930 207 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 TSLPQ969D9 159 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 POP5Q969H6 163 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 FAM3DQ96BQ1 224 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 SLC35G5Q96KT7 338 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 RNF145Q96MT1 663 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ZNF578Q96N58 590 aaPredicted RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 TRNT1Q96Q11 434 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 OR7D2Q96RA2 312 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 DDA1Q9BW61 102 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 CHID1Q9BWS9 393 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 UGT2B28Q9BY64 529 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 MRPL37Q9BZE1 423 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 OR8D2Q9GZM6 311 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 OR51I1Q9H343 314 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 TMEM38AQ9H6F2 299 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ANKRA2Q9H9E1 313 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 CACYBPQ9HB71 228 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 INPP5EQ9NRR6 644 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 C14orf105Q9NVL8 296 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 MAT2BQ9NZL9 334 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 CALML5Q9NZT1 146 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 CTSFQ9UBX1 484 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 ZNF629Q9UEG4 869 aaPredicted RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 C3orf18Q9UK00 162 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 NXT1Q9UKK6 140 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 ANGPT4Q9Y264 503 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 MYO18AQ92614 2054 aaKnown RBP2.37□□□□□ -2.03
CBX3-207ENST00000481300 MYOFQ9NZM1 2061 aa2.37□□□□□ -2.03
CBX3-207ENST00000481300 BDP1A6H8Y1 2624 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms