RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 OR51A2Q8NGJ7 313 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 KCNG3Q8TAE7 436 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 C22orf15Q8WYQ4 148 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 ST8SIA4Q92187 359 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 CST11Q9H112 138 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 DIABLOQ9NR28 239 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 RAB22AQ9UL26 194 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 AUP1Q9Y679 476 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 IGKV1-12A0A0C4DH73 117 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 SMIM30A4D0T7 59 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 RFPL4AA6NLU0 287 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 RFPL4AL1F8VTS6 287 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 SIGLEC5O15389 551 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 SPRY1O43609 319 aaPredicted RBP10.1□□□□□ -0.79
PTPRF-213ENST00000481019 IGKV1D-12P01611 117 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 SFTPBP07988 381 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 ACAA1P09110 424 aaPredicted RBP10.1□□□□□ -0.79
PTPRF-213ENST00000481019 SLC2A2P11168 524 aaPredicted RBP10.1□□□□□ -0.79
PTPRF-213ENST00000481019 PTGFRP43088 359 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 GABRA2P47869 451 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 NPBWR2P48146 333 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 PPP5CP53041 499 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 DLX1P56177 255 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 FGF12P61328 243 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 PRB3Q04118 309 aaPredicted RBP10.1□□□□□ -0.79
PTPRF-213ENST00000481019 IL24Q13007 206 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 ARL6IP1Q15041 203 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 C2orf76Q3KRA6 126 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 AWAT2Q6E213 333 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 SLC25A26Q70HW3 274 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 OR2W3Q7Z3T1 314 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 CCDC190Q86UF4 302 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 NR2C2APQ86WQ0 139 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 MKXQ8IYA7 352 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 BCL6BQ8N143 479 aaPredicted RBP10.1□□□□□ -0.79
PTPRF-213ENST00000481019 ZNRF1Q8ND25 227 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 ZFAND2BQ8WV99 257 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 BORCS5Q969J3 196 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 MRPS24Q96EL2 167 aaKnown RBP10.1□□□□□ -0.79
PTPRF-213ENST00000481019 PKIBQ9C010 78 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 ABCG5Q9H222 651 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 RHOFQ9HBH0 211 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 PALMDQ9NP74 551 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 FBLN5Q9UBX5 448 aa10.1□□□□□ -0.79
PTPRF-213ENST00000481019 ANGPTL7O43827 346 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 KDM4BO94953 1096 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 NXPH2O95156 264 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 CSTBP04080 98 aaKnown RBP10.09□□□□□ -0.79
PTPRF-213ENST00000481019 CHRM2P08172 466 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 MMP9P14780 707 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 BCL3P20749 454 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 EPHA1P21709 976 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 PRDX2P32119 198 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 POU3F4P49335 361 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 NPY4RP50391 375 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 FAM131AQ6UXB0 335 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 SAXO1Q8IYX7 474 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 GDPD1Q8N9F7 314 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 LY6G5BQ8NDX9 201 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 PXT1Q8NFP0 134 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 OR51D1Q8NGF3 324 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 OR5D18Q8NGL1 313 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 SDSLQ96GA7 329 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 TBX15Q96SF7 602 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 GFI1Q99684 422 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 SLC6A7Q99884 636 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 URM1Q9BTM9 101 aaKnown RBP10.09□□□□□ -0.79
PTPRF-213ENST00000481019 METTL9Q9H1A3 318 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 CNTD2Q9H8S5 307 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 RBFOX1Q9NWB1 397 aaKnown RBP10.09□□□□□ -0.79
PTPRF-213ENST00000481019 RASL12Q9NYN1 266 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 ZNF69Q9UC07 566 aa10.09□□□□□ -0.79
PTPRF-213ENST00000481019 RPUSD1Q9UJJ7 312 aaKnown RBP10.09□□□□□ -0.79
PTPRF-213ENST00000481019 MRPS28Q9Y2Q9 187 aaKnown RBP10.09□□□□□ -0.79
PTPRF-213ENST00000481019 NDUFB3O43676 98 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 ENSAO43768 121 aaKnown RBP10.08□□□□□ -0.8
PTPRF-213ENST00000481019 HPGDSO60760 199 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 VENTXO95231 258 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 TMEM225BP0DP42 221 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
PTPRF-213ENST00000481019 IL13RA1P78552 427 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 MRPS10P82664 201 aaKnown RBP10.08□□□□□ -0.8
PTPRF-213ENST00000481019 DCTN2Q13561 401 aaKnown RBP10.08□□□□□ -0.8
PTPRF-213ENST00000481019 TUSC1Q2TAM9 212 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 PYHIN1Q6K0P9 492 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 C16orf87Q6PH81 154 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 GLIPR1L1Q6UWM5 242 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 BTNL3Q6UXE8 466 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 SLC36A1Q7Z2H8 476 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 LYPD6Q86Y78 171 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 LAX1Q8IWV1 398 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 NANPQ8TBE9 248 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 LGALS14Q8TCE9 139 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 TNFAIP8L1Q8WVP5 186 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 UPRTQ96BW1 309 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 CCDC32Q9BV29 185 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 SIRPDQ9H106 197 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 DNTTIP1Q9H147 329 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 AKIP1Q9NQ31 210 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 RHBDL2Q9NX52 303 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms