RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 MAP2P11137 1827 aaKnown RBP6.31□□□□□ -1.4
LSM5-210ENST00000480956 ROBO1Q9Y6N7 1651 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 TRAV8-6A0A0B4J262 113 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 H0Y9J4 135 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 MYL12BO14950 172 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 OR7C1O76099 320 aaPredicted RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 CSF3P09919 207 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 GABRA1P14867 456 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 HIST1H1TP22492 207 aaPredicted RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 WARSP23381 471 aaKnown RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 S100GP29377 79 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 TCTAP57738 103 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 AP1S1P61966 158 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 HIST1H3AP68431 136 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 H3F3AP84243 136 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 REG3GQ6UW15 175 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 GDPGP1Q6ZNW5 385 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 HIST2H3AQ71DI3 136 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 CATSPER3Q86XQ3 398 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 UBAC2Q8NBM4 344 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 THAP10Q9P2Z0 257 aaPredicted RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 OR12D3Q9UGF7 316 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 TRMT112Q9UI30 125 aaKnown RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 COL11A2P13942 1736 aaPredicted RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 CPSF1Q10570 1443 aaKnown RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 ANKARQ7Z5J8 1434 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 KIF1AQ12756 1690 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 ARHGEF10O15013 1369 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 TRAV8-2A0A0B4J237 113 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 GPR31O00270 319 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 FGF17O60258 216 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 CD48P09326 243 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 SPNP16150 400 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 LGALS7P47929 136 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 NDUFA8P51970 172 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 DYNLL1P63167 89 aaKnown RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 FZD2Q14332 565 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 LRRC36Q1X8D7 754 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 MORN5Q5VZ52 161 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 LCN12Q6JVE5 192 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 CXCL17Q6UXB2 119 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 DGAT2L6Q6ZPD8 337 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 GALNT10Q86SR1 603 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 STX19Q8N4C7 294 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 NRACQ8N912 160 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 GPR26Q8NDV2 337 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 OR10G9Q8NGN4 311 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 OR4X1Q8NH49 305 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 SLC25A15Q9Y619 301 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 TMEM56-RWDD3S4R434 201 aa6.3□□□□□ -1.4
LSM5-210ENST00000480956 EDC4Q6P2E9 1401 aaKnown RBP6.3□□□□□ -1.4
LSM5-210ENST00000480956 TRPM3Q9HCF6 1732 aaPredicted RBP6.29□□□□□ -1.4
LSM5-210ENST00000480956 LTN1O94822 1766 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 IGHV4-30-2A0A087WSY4 118 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 FAM159BA6NKW6 160 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 BTNL10A8MVZ5 291 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 PI15O43692 258 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 NPIPB7O75200 414 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 ALPLP05186 524 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 FAM228BP0C875 321 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 ZNF20P17024 532 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 RAB3BP20337 219 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 PSMB1P20618 241 aaKnown RBP6.29□□□□□ -1.4
LSM5-210ENST00000480956 OR1E2P47887 323 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 INCA1Q0VD86 236 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 CYB5R2Q6BCY4 276 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 SLC35E4Q6ICL7 350 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 TEX43Q6ZNM6 134 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 NAA40Q86UY6 237 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 ZNF575Q86XF7 245 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 CIARTQ8N365 385 aaPredicted RBP6.29□□□□□ -1.4
LSM5-210ENST00000480956 C11orf72Q8NBR9 251 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 MCFD2Q8NI22 146 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 RNF185Q96GF1 192 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 DCUN1D1Q96GG9 259 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 CLCF1Q9UBD9 225 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 HSPB11Q9Y547 144 aa6.29□□□□□ -1.4
LSM5-210ENST00000480956 SNAP91O60641 907 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 ATG12O94817 140 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 CD79AP11912 226 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 ZNF718Q3SXZ3 478 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 SMARCD3Q6STE5 483 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 NOTCH2NLQ7Z3S9 236 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 FAM220AQ7Z4H9 259 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 ZNF561Q8N587 486 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 OR1N2Q8NGR9 330 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 OR10D3Q8NH80 312 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 OR1S1Q8NH92 325 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 LZICQ8WZA0 190 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 QKIQ96PU8 341 aaKnown RBP eCLIP6.28□□□□□ -1.4
LSM5-210ENST00000480956 RTBDNQ9BSG5 229 aaPredicted RBP6.28□□□□□ -1.4
LSM5-210ENST00000480956 GABARAPL3Q9BY60 117 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 UTP11Q9Y3A2 253 aaKnown RBP6.28□□□□□ -1.4
LSM5-210ENST00000480956 SHPRHQ149N8 1683 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 PEAK1Q9H792 1746 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 REG1AP05451 166 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms