RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 RPL36Q9Y3U8 105 aaKnown RBP3.82□□□□□ -1.8
UPF3A-205ENST00000479712 HUWE1Q7Z6Z7 4374 aaKnown RBP3.81□□□□□ -1.8
UPF3A-205ENST00000479712 TNFSF11O14788 317 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 CIB2O75838 187 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 KCNK2O95069 426 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 UTS2O95399 124 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 STAMBPO95630 424 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 HMGN2P05204 90 aaKnown RBP3.81□□□□□ -1.8
UPF3A-205ENST00000479712 IDO1P14902 403 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF708P17019 499 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF17P17021 662 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 PSMB1P20618 241 aaKnown RBP3.81□□□□□ -1.8
UPF3A-205ENST00000479712 BGNP21810 368 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 GABRA3P34903 492 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 UGT2B10P36537 528 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 CD79BP40259 229 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 MAGOHP61326 146 aaKnown RBP3.81□□□□□ -1.8
UPF3A-205ENST00000479712 RCAN2Q14206 197 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 SSX2Q16385 188 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 NNATQ16517 81 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 NSUN5P1Q3KNT7 163 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 C6orf226Q5I0X4 101 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 PRR22Q8IZ63 422 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 COX18Q8N8Q8 333 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 OR2M3Q8NG83 312 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 OR4K17Q8NGC6 315 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 OR9K2Q8NGE7 335 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 OR52H1Q8NGJ2 320 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 GPR151Q8TDV0 419 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 CIDECQ96AQ7 238 aaPredicted RBP3.81□□□□□ -1.8
UPF3A-205ENST00000479712 ATP6V1G3Q96LB4 118 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 JSRP1Q96MG2 331 aaPredicted RBP3.81□□□□□ -1.8
UPF3A-205ENST00000479712 CCDC115Q96NT0 180 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 C1orf50Q9BV19 199 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 TBL1XR1Q9BZK7 514 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 DPY30Q9C005 99 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 BPESC1Q9GZL8 116 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 C20orf27Q9GZN8 174 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 ANKRA2Q9H9E1 313 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 AIG1Q9NVV5 245 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 PAQR5Q9NXK6 330 aaPredicted RBP3.81□□□□□ -1.8
UPF3A-205ENST00000479712 MMP24Q9Y5R2 645 aa3.81□□□□□ -1.8
UPF3A-205ENST00000479712 DYNC1H1Q14204 4646 aaKnown RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 HSPG2P98160 4391 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 E9PBE3 544 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 H3BNH8 94 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 DCTN6O00399 190 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 EIF4E2O60573 245 aaKnown RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 TRAPPC6AO75865 159 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 RCBTB2O95199 551 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 OXSR1O95747 527 aaPredicted RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 C6orf47O95873 294 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 IGKV1D-16P01601 117 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 IL6P05231 212 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 P0C879 139 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 ETS2P15036 469 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 ELK4P28324 431 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 S100A3P33764 101 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 EIF1P41567 113 aaKnown RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 LHX2P50458 406 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 SUCLG1P53597 346 aaKnown RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 CLDN18P56856 261 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 HBA1P69905 142 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 EGFEM1PQ0D2K5 195 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 OXA1LQ15070 435 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF141Q15928 474 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF239Q16600 458 aaKnown RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 SAMD4BQ5PRF9 694 aaKnown RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 SAXO2Q658L1 398 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 ANKRD26P1Q6NSI1 321 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 UNQ9370/PRO34162Q6UXP9 181 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 GDPD3Q7L5L3 318 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 EGFL6Q8IUX8 553 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 GTPBP8Q8N3Z3 284 aaPredicted RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 KRTCAP2Q8N6L1 136 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 TRIML2Q8N7C3 387 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 CLHC1Q8NHS4 586 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 AGR3Q8TD06 166 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF75CPQ92670 426 aaPredicted RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 UFD1Q92890 307 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 LRRC58Q96CX6 371 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 NEURL3Q96EH8 262 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 SIKE1Q9BRV8 207 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 SFXN3Q9BWM7 321 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 EXD2Q9NVH0 621 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 THUMPD1Q9NXG2 353 aaKnown RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 CLCF1Q9UBD9 225 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 DKKL1Q9UK85 242 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 GMEB1Q9Y692 573 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 MUC2Q02817 5179 aa3.8□□□□□ -1.8
UPF3A-205ENST00000479712 TET2Q6N021 2002 aaPredicted RBP3.8□□□□□ -1.8
UPF3A-205ENST00000479712 NINQ8N4C6 2090 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 C5orf63A6NC05 138 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF716A6NP11 495 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 UBDO15205 165 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 KRT75O95678 551 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 HSPB1P04792 205 aaKnown RBP3.79□□□□□ -1.8
UPF3A-205ENST00000479712 CSF3P09919 207 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF735P0CB33 412 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms