RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 CDK2P24941 298 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 MNDAP41218 407 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 OR3A1P47881 315 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 NPBWR2P48146 333 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 THBS3P49746 956 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 GP2P55259 537 aaKnown RBP10.57□□□□□ -0.72
ABCF1-206ENST00000479542 ISL1P61371 349 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 LHFPL2Q6ZUX7 228 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 KCTD20Q7Z5Y7 419 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 COMMD1Q8N668 190 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 YIPF7Q8N8F6 280 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 CHST4Q8NCG5 386 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 TRUB1Q8WWH5 349 aaKnown RBP10.57□□□□□ -0.72
ABCF1-206ENST00000479542 RFKQ969G6 155 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 MBOAT4Q96T53 435 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 LINC00574Q9H8X3 128 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 IMPAD1Q9NX62 359 aa10.57□□□□□ -0.72
ABCF1-206ENST00000479542 RPP14O95059 124 aaKnown RBP10.56□□□□□ -0.72
ABCF1-206ENST00000479542 ATP6V1E1P36543 226 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 MYCNOSP40205 109 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 SNRPGP62308 76 aaKnown RBP10.56□□□□□ -0.72
ABCF1-206ENST00000479542 CD69Q07108 199 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 TPTE2P1Q5T6R2 138 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 TMEM244Q5VVB8 128 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 C11orf87Q6NUJ2 197 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 FDX2Q6P4F2 183 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 SLC16A12Q6ZSM3 486 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 TRAPPC6BQ86SZ2 158 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 MRPL41Q8IXM3 137 aaKnown RBP10.56□□□□□ -0.72
ABCF1-206ENST00000479542 SAXO1Q8IYX7 474 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 BATF2Q8N1L9 274 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 TPRX1Q8N7U7 411 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 OR10H4Q8NGA5 316 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 CHPT1Q8WUD6 406 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 SLC29A1Q99808 456 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 CHST6Q9GZX3 395 aa10.56□□□□□ -0.72
ABCF1-206ENST00000479542 RBFOX1Q9NWB1 397 aaKnown RBP10.56□□□□□ -0.72
ABCF1-206ENST00000479542 IGKV1-9A0A0C4DH69 117 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 MEX3AA1L020 520 aaKnown RBP10.55□□□□□ -0.72
ABCF1-206ENST00000479542 PSMB11A5LHX3 300 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 ZNF729A6NN14 1252 aaPredicted RBP10.55□□□□□ -0.72
ABCF1-206ENST00000479542 FGF16O43320 207 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 RAMP3O60896 148 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 KDM4BO94953 1096 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 OR2H2O95918 312 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 CGB3P0DN86 165 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 CGB7P0DN87 165 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 ATF1P18846 271 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 BCL3P20749 454 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 MTCP1P56278 107 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 PAX5Q02548 391 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 ZNF85Q03923 595 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 SLC25A30Q5SVS4 291 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 ETV3LQ6ZN32 361 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 PQLC1Q8N2U9 271 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 OR4D6Q8NGJ1 314 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 P2RX4Q99571 388 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 C9orf16Q9BUW7 83 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 EXOSC4Q9NPD3 245 aaKnown RBP10.55□□□□□ -0.72
ABCF1-206ENST00000479542 OR6C3Q9NZP0 311 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 IL36RNQ9UBH0 155 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 MOB4Q9Y3A3 225 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 HSPE1-MOB4S4R3N1 261 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 KIAA2026Q5HYC2 2103 aa10.55□□□□□ -0.72
ABCF1-206ENST00000479542 ODAMA1E959 279 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 H0YHG0 523 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 J3QRE1 110 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 TOR1AO14656 332 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 ZFPL1O95159 310 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 RPSAP08865 295 aaKnown RBP10.54□□□□□ -0.72
ABCF1-206ENST00000479542 PRKACAP17612 351 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 PTGFRP43088 359 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 RPL23AP62750 156 aaKnown RBP10.54□□□□□ -0.72
ABCF1-206ENST00000479542 MEDAGQ5VYS4 303 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 UNQ9370/PRO34162Q6UXP9 181 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 PRSS35Q8N3Z0 413 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 OR9G1Q8NH87 305 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 RNFT2Q96EX2 444 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 ZNF286AQ9HBT8 521 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 NEK6Q9HC98 313 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 AASSQ9UDR5 926 aa10.54□□□□□ -0.72
ABCF1-206ENST00000479542 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-206ENST00000479542 KBTBD11-OT1A0A1B0GTJ5 212 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 LOC107986453A0A1B0GWG9 222 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 IGHG2P01859 326 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 GABRB1P18505 474 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 CD24P25063 80 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 DUSP1P28562 367 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 GLIPR1P48060 266 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 CCR9P51686 369 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 ODF4Q2M2E3 257 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 C17orf58Q2M2W7 97 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 TP53I3Q53FA7 332 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 PRAMEF5Q5TYX0 476 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 Q6P435 159 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 C10orf99Q6UWK7 81 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 OR2W3Q7Z3T1 314 aa10.53□□□□□ -0.72
ABCF1-206ENST00000479542 OR8H3Q8N146 312 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms