RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 ANXA2P07355 339 aaKnown RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 OR5H8P0DN80 308 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 EGR2P11161 476 aaPredicted RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 BLVRBP30043 206 aaPredicted RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 OR3A1P47881 315 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 NPBWR2P48146 333 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 CX3CR1P49238 355 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 SLC7A2P52569 658 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 ZNF121P58317 390 aaPredicted RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 TAS2R41P59536 307 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 PRKCDQ05655 676 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 GALEQ14376 348 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 MAPRE2Q15555 327 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 C17orf58Q2M2W7 97 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 ZBED5Q49AG3 693 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 IGSF11Q5DX21 431 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 PAGE3Q5JUK9 113 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 WDR73Q6P4I2 378 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 MSANTD1Q6ZTZ1 278 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 Q6ZWC4 215 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 FAM57BQ71RH2 274 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 SPATA12Q7Z6I5 190 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 ADCK1Q86TW2 530 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 OR8H3Q8N146 312 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 C11orf45Q8TAV5 145 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 ZNF671Q8TAW3 534 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 DYDC1Q8WWB3 177 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 LZICQ8WZA0 190 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 FLYWCH2Q96CP2 140 aaKnown RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 WDR89Q96FK6 387 aaPredicted RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 KIRREL1Q96J84 757 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 HRASLS5Q96KN8 279 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 RHOVQ96L33 236 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 SNX22Q96L94 193 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 ATP6V1G3Q96LB4 118 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 CCDC140Q96MF4 163 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 SPACA5Q96QH8 159 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 GPX7Q96SL4 187 aaPredicted RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 NMNAT3Q96T66 252 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 FMO2Q99518 471 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 SIKE1Q9BRV8 207 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 PLEKHA1Q9HB21 404 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 RPRD1BQ9NQG5 326 aaKnown RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 MBNL3Q9NUK0 354 aaKnown RBP3.52□□□□□ -1.85
USP4-209ENST00000475873 MBD2Q9UBB5 411 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 AASSQ9UDR5 926 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 SLC7A11Q9UPY5 501 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 MUC2Q02817 5179 aa3.52□□□□□ -1.85
USP4-209ENST00000475873 A0A087WUU8 490 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 IGHV1-3A0A0C4DH29 117 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 A0A1W2PPE3 182 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 J3KTA2 159 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 J3QR06 171 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 J3QT63 122 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 TOR1AO14656 332 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 FFAR1O14842 300 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 DEFB4AO15263 64 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 MPZL2O60487 215 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 NOL3O60936 208 aaKnown RBP3.51□□□□□ -1.85
USP4-209ENST00000475873 RENP00797 406 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 BPGMP07738 259 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 CGB3P0DN86 165 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 CGB7P0DN87 165 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 IDO1P14902 403 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 HIST1H1CP16403 213 aaKnown RBP3.51□□□□□ -1.85
USP4-209ENST00000475873 MPZP25189 248 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 CRABP1P29762 137 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 FCGR2BP31994 310 aaPredicted RBP3.51□□□□□ -1.85
USP4-209ENST00000475873 PYCR1P32322 319 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 GLIPR1P48060 266 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 ALDH3A2P51648 485 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 POLR2JP52435 117 aaKnown RBP3.51□□□□□ -1.85
USP4-209ENST00000475873 SLC18A1P54219 525 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 P2RX3P56373 397 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 GRK1Q15835 563 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 CEACAM21Q3KPI0 293 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 C1orf134Q5TEV5 83 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 OR52W1Q6IF63 320 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 FUNDC1Q8IVP5 155 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 LAX1Q8IWV1 398 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 TIGD4Q8IY51 512 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 PRR18Q8N4B5 295 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 MREGQ8N565 214 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 STPG3Q8N7X2 389 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 SYT8Q8NBV8 401 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 OR9G1Q8NH87 305 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 CORO2AQ92828 525 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 CREB3L1Q96BA8 519 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 SLAMF6Q96DU3 332 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 RITA1Q96K30 269 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 NR1H4Q96RI1 486 aaPredicted RBP3.51□□□□□ -1.85
USP4-209ENST00000475873 AMELYQ99218 206 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 RASL11BQ9BPW5 248 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 TXLNGYQ9BZA5 131 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 BRD7Q9NPI1 651 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 ZC4H2Q9NQZ6 224 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 PARP11Q9NR21 331 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 SDR39U1Q9NRG7 319 aaPredicted RBP3.51□□□□□ -1.85
USP4-209ENST00000475873 PCDHB16Q9NRJ7 776 aa3.51□□□□□ -1.85
USP4-209ENST00000475873 CENPMQ9NSP4 180 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms