RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 BEX4Q9NWD9 120 aaPredicted RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 PCDHB10Q9UN67 800 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 PLEKHA6Q9Y2H5 1048 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 POLR1DQ9Y2S0 133 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 NOP16Q9Y3C1 178 aaKnown RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 UTP20O75691 2785 aaKnown RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 SPTBN1Q01082 2364 aaKnown RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 IGHV1-18A0A0C4DH31 117 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A1B0GW55 424 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A1W2PR80 420 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 TMEM218A2RU14 115 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 OR2AT4A6NND4 320 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF705EA8MWA4 302 aaPredicted RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 SOCS1O15524 211 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 IGKV3-15P01624 115 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 CRYAAP02489 173 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 IFNA6P05013 189 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 IFNA4P05014 189 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 DUX4L2P0CJ85 424 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 DUX4L3P0CJ86 424 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 DUX4L4P0CJ87 422 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 DUX4L5P0CJ88 424 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 DUX4L6P0CJ89 424 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 DUX4L7P0CJ90 424 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 RPA2P15927 270 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF20P17024 532 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 MSR1P21757 451 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 PPT1P50897 306 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 TMEM50BP56557 158 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF121P58317 390 aaPredicted RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 LSM6P62312 80 aaKnown RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 PLP2Q04941 152 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 FABP9Q0Z7S8 132 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 PPP1R1AQ13522 171 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 CLINT1Q14677 625 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 KCNMB1Q16558 191 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 FAM27BQ5VT28 67 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 UNQ6126/PRO20091Q6UXV3 157 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 KCTD9Q7L273 389 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 MDP1Q86V88 176 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 SLC25A42Q86VD7 318 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF611Q8N823 705 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ADAD2Q8NCV1 583 aaKnown RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 OR8B12Q8NGG6 310 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 OR1S2Q8NGQ3 325 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 OR10R2Q8NGX6 335 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 CASTOR1Q8WTX7 329 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 PPP1R1CQ8WVI7 109 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 PIGTQ969N2 578 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 SGK3Q96BR1 496 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 MBD6Q96DN6 1003 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF837Q96EG3 531 aaPredicted RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 FAM71F1Q96KD3 344 aaPredicted RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 PRRT1Q99946 306 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 MICU1Q9BPX6 476 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 OR51M1Q9H341 326 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 UBTD1Q9HAC8 227 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 BARX1Q9HBU1 254 aaPredicted RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 GPR84Q9NQS5 396 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 DUX4Q9UBX2 424 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF107Q9UII5 783 aaPredicted RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 TIMM10BQ9Y5J6 103 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 FREM1Q5H8C1 2179 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A0A6YYD4 124 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A1B0GV90 55 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 C13orf42A0A1B0GVH6 325 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A1W2PP11 408 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 C9orf170A2RU37 121 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 C5orf63A6NC05 138 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 TMEM14DPA8MWL7 114 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 SHISA9B4DS77 424 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF878C9JN71 531 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ST8SIA5O15466 376 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 BPNT1O95861 308 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 MPIG6BO95866 241 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 CD8AP01732 235 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 IGHV2-70P01814 119 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 HLA-HP01893 362 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 SMIM6P0DI80 62 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 COX5BP10606 129 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 VAMP1P23763 118 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZBTB25P24278 435 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 S100PP25815 95 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 AKR1C3P42330 323 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 OR3A4PP47883 348 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ATP1B3P54709 279 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 RPS23P62266 143 aaKnown RBP3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 RAB1AP62820 205 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 NAAAQ02083 359 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 MEF2DQ14814 521 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF124Q15973 351 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 MICBQ29980 383 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 Q3ZCU0 254 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 PLAC9Q5JTB6 97 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 C11orf87Q6NUJ2 197 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF529Q6P280 563 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 SLC22A25Q6T423 547 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 FAM57BQ71RH2 274 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 LYG2Q86SG7 212 aa3.58□□□□□ -1.84
GAPVD1-216ENST00000474637 SKA3Q8IX90 412 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms