RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 TMEM204Q9BSN7 226 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 C20orf27Q9GZN8 174 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CNTD2Q9H8S5 307 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SH2D2AQ9NP31 389 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 TAS2R5Q9NYW4 299 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 KCNK7Q9Y2U2 307 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 STARD10Q9Y365 291 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 BRCA1P38398 1863 aaKnown RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 ZNFX1Q9P2E3 1918 aaKnown RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF638Q14966 1978 aaKnown RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 C9orf172C9J069 976 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 MPDU1O75352 247 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SNAPINO95295 136 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 MBPP02686 304 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 THBDP07204 575 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CTSDP07339 412 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 USF1P22415 310 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 FGF12P61328 243 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 TNXAQ16473 311 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SPATA46Q5T0L3 261 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 OR2G6Q5TZ20 316 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 RPL7L1Q6DKI1 246 aaKnown RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 LIAT1Q6ZQX7 453 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CENPVQ7Z7K6 275 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF546Q86UE3 836 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 COMTD1Q86VU5 262 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 OR2T35Q8NGX2 323 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SLC25A28Q96A46 364 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 C19orf24Q9BVV8 132 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 UQCC1Q9NVA1 299 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 DLL3Q9NYJ7 618 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF225Q9UK10 706 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 HMX2A2RU54 273 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 CLEC18AA5D8T8 446 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 H3BMQ9 156 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TIMM23O14925 209 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SYNGR1O43759 233 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 OPRK1P41145 380 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SELENOPP49908 381 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 CD83Q01151 205 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SLC9A3R2Q15599 337 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 C3AR1Q16581 482 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 AADACL4Q5VUY2 407 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SIGIRRQ6IA17 410 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 CORO6Q6QEF8 472 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 CCBE1Q6UXH8 406 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 PIP4P1Q86T03 277 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ZIC4Q8N9L1 334 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 CLEC18CQ8NCF0 446 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM18Q96B42 140 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SCMH1Q96GD3 660 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 LURAP1Q96LR2 239 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 GPR82Q96P67 336 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 RNF5Q99942 180 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF436Q9C0F3 470 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 DUSP21Q9H596 190 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SBF1O95248 1867 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 A0A0B4J293 547 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 FAM90A26D6RGX4 464 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SSX4O60224 188 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ALX3O95076 343 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SNRPBP14678 240 aaKnown RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MPV17P39210 176 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 KIR2DL2P43627 348 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 RPL27AP46776 148 aaKnown RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ATP5G2Q06055 141 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MMDQ15546 238 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MINOS1Q5TGZ0 78 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM268Q5VZI3 342 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 C12orf54Q6X4T0 127 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 PRSS41Q7RTY9 318 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SLC26A10Q8NG04 563 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ZNRF4Q8WWF5 429 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MRPL24Q96A35 216 aaKnown RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 DMRTB1Q96MA1 342 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 PCGF1Q9BSM1 259 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ABHD14AQ9BUJ0 271 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TMUB1Q9BVT8 246 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 Q9N2K0 584 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM106BQ9NUM4 274 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 KLK13Q9UKR3 277 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MINOS1-NBL1R4GNA1 71 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 COL11A1P12107 1806 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TCRBV5S2A0A599 114 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM229AB2RXF0 380 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SMAD9O15198 467 aaKnown RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SLC31A2O15432 143 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 OGG1O15527 345 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SSX5O60225 188 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 IGHG3P01860 377 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 PMP2P02689 132 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ASAH2BP0C7U1 165 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 OR13C7P0DN81 318 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 PAX6P26367 422 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SLC35A2P78381 396 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 LSM11P83369 360 aaKnown RBP eCLIP4.02□□□□□ -1.772e-6■■■□□ 17.4
CCNL1-215ENST00000474539 PDZK1IP1Q13113 114 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SLC16A13Q7RTY0 426 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 C16orf82Q7Z2V1 217 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 CCDC71Q8IV32 467 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms