RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 IL13RA1P78552 427 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 IGSF11Q5DX21 431 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 WFDC8Q8IUA0 241 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 OR2Z1Q8NG97 314 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 TMEM171Q8WVE6 324 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 POM121Q96HA1 1249 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 HYLS1Q96M11 299 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 TMEM246Q9BRR3 403 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 DPCDQ9BVM2 203 aaPredicted RBP15.24■□□□□ 0.03
VARS2-206ENST00000473916 CXXC4Q9H2H0 198 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 PLK3Q9H4B4 646 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 ZNF286AQ9HBT8 521 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 NECAP2Q9NVZ3 263 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 SLC23A1Q9UHI7 598 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 HSPB11Q9Y547 144 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 CACNA1DQ01668 2161 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 TPRP12270 2363 aaKnown RBP15.24■□□□□ 0.03
VARS2-206ENST00000473916 ZSCAN5BA6NJL1 495 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 TMEM210A6NLX4 147 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 MCRIP1C9JLW8 97 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 GIPP09681 153 aaPredicted RBP15.24■□□□□ 0.03
VARS2-206ENST00000473916 TUBG1P23258 451 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 CD40P25942 277 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 PMELP40967 661 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 IL13RA2Q14627 380 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 GRK1Q15835 563 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 C11orf88Q6PI97 169 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 RND1Q92730 232 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 TUBG2Q9NRH3 451 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 KIAA2026Q5HYC2 2103 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 OR2H2O95918 312 aa15.23■□□□□ 0.03
VARS2-206ENST00000473916 ZNF250P15622 560 aa15.23■□□□□ 0.03
VARS2-206ENST00000473916 SUPT4H1P63272 117 aaKnown RBP15.23■□□□□ 0.03
VARS2-206ENST00000473916 SNTB1Q13884 538 aaKnown RBP15.23■□□□□ 0.03
VARS2-206ENST00000473916 LY6DQ14210 128 aa15.23■□□□□ 0.03
VARS2-206ENST00000473916 C3orf36Q3SXR2 165 aa15.23■□□□□ 0.03
VARS2-206ENST00000473916 TRAF4Q9BUZ4 470 aaPredicted RBP15.23■□□□□ 0.03
VARS2-206ENST00000473916 RANBP3Q9H6Z4 567 aaPredicted RBP15.23■□□□□ 0.03
VARS2-206ENST00000473916 Q9N2K0 584 aa15.23■□□□□ 0.03
VARS2-206ENST00000473916 ELOVL5Q9NYP7 299 aa15.23■□□□□ 0.03
VARS2-206ENST00000473916 OPN4Q9UHM6 478 aa15.23■□□□□ 0.03
VARS2-206ENST00000473916 MEMO1Q9Y316 297 aa15.23■□□□□ 0.03
VARS2-206ENST00000473916 TRAV39A0A0B4J263 110 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.22■□□□□ 0.03
VARS2-206ENST00000473916 DEGS1O15121 323 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 SCTP09683 121 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 PGAM2P15259 253 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 GLRXP35754 106 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 SLC9A3R2Q15599 337 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 WDR82Q6UXN9 313 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 LINC00596Q86U02 117 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 MRPL30Q8TCC3 161 aaKnown RBP15.22■□□□□ 0.03
VARS2-206ENST00000473916 VKORC1Q9BQB6 163 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 FXYD6Q9H0Q3 95 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 KNG1P01042 644 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 NFYAP23511 347 aaPredicted RBP15.22■□□□□ 0.03
VARS2-206ENST00000473916 FCGR2CP31995 323 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 FXYD4P59646 89 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 HERPUD1Q15011 391 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 POC1AQ8NBT0 407 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 TMEM185AQ8NFB2 350 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 MITD1Q8WV92 249 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 TOMM40LQ969M1 308 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 OR14J1Q9UGF5 321 aa15.22■□□□□ 0.03
VARS2-206ENST00000473916 A0A1B0GWJ7 208 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 PRSS44E7EML9 344 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 SLC33A1O00400 549 aaPredicted RBP15.21■□□□□ 0.03
VARS2-206ENST00000473916 RPS2P15880 293 aaKnown RBP15.21■□□□□ 0.03
VARS2-206ENST00000473916 KLF3P57682 345 aaPredicted RBP15.21■□□□□ 0.03
VARS2-206ENST00000473916 DHODHQ02127 395 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 TMEM128Q5BJH2 165 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 FAHD2BQ6P2I3 314 aaPredicted RBP15.21■□□□□ 0.03
VARS2-206ENST00000473916 DHRS11Q6UWP2 260 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 CLEC18BQ6UXF7 455 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 KCTD9Q7L273 389 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 Q8IYB0 196 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 PLPPR1Q8TBJ4 325 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 FAHD2AQ96GK7 314 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 MRPL37Q9BZE1 423 aaKnown RBP15.21■□□□□ 0.03
VARS2-206ENST00000473916 TLNRD1Q9H1K6 362 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 HES4Q9HCC6 221 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 SPEF1Q9Y4P9 236 aa15.21■□□□□ 0.03
VARS2-206ENST00000473916 hCG_1807616A0A1W2PRN6 198 aa15.21■□□□□ 0.02
VARS2-206ENST00000473916 DPRXA6NFQ7 191 aa15.21■□□□□ 0.02
VARS2-206ENST00000473916 IGHV3-13P01766 116 aa15.21■□□□□ 0.02
VARS2-206ENST00000473916 PPP3CBP16298 524 aa15.21■□□□□ 0.02
VARS2-206ENST00000473916 RCC1P18754 421 aaPredicted RBP15.21■□□□□ 0.02
VARS2-206ENST00000473916 TAS2R31P59538 309 aa15.21■□□□□ 0.02
VARS2-206ENST00000473916 RAP2BP61225 183 aa15.21■□□□□ 0.02
VARS2-206ENST00000473916 IFT22Q9H7X7 185 aa15.21■□□□□ 0.02
VARS2-206ENST00000473916 SPACA1Q9HBV2 294 aa15.21■□□□□ 0.02
VARS2-206ENST00000473916 PKD1L2Q7Z442 2459 aa15.2■□□□□ 0.02
VARS2-206ENST00000473916 DIDO1Q9BTC0 2240 aaKnown RBP15.2■□□□□ 0.02
VARS2-206ENST00000473916 IGKV1-6A0A0C4DH72 117 aa15.2■□□□□ 0.02
VARS2-206ENST00000473916 DUS4LO95620 317 aaKnown RBP15.2■□□□□ 0.02
VARS2-206ENST00000473916 ATXN7L3Q14CW9 347 aaPredicted RBP15.2■□□□□ 0.02
VARS2-206ENST00000473916 ZNF146Q15072 292 aa15.2■□□□□ 0.02
VARS2-206ENST00000473916 PAN3Q58A45 887 aaKnown RBP15.2■□□□□ 0.02
VARS2-206ENST00000473916 C1orf174Q8IYL3 243 aa15.2■□□□□ 0.02
VARS2-206ENST00000473916 OR5M8Q8NGP6 311 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms