RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 OR2J2O76002 312 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 STK17BO94768 372 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RCBTB2O95199 551 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MPZL1O95297 269 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 AHSA1O95433 338 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PTTG1O95997 202 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PNPP00491 289 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 F10P00742 488 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 IFNGP01579 166 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 HLA-DQB1P01920 261 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OPN1LWP04000 364 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 HMGN1P05114 100 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 EIF4EP06730 217 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 GP1BAP07359 652 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CSF3P09919 207 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 UCHL1P09936 223 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OCM2P0CE71 109 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OCMP0CE72 109 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PGA4P0DJD7 388 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PGA3P0DJD8 388 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 IL7P13232 177 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RPS2P15880 293 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MYL12AP19105 171 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CELP19835 753 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PGCP20142 388 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ALOX5APP20292 161 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MDKP21741 143 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PAICSP22234 425 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 LCN1P31025 176 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 FGF9P31371 208 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OTX2P32243 289 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 IFNA8P32881 189 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RPL4P36578 427 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DLSTP36957 453 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DDOSTP39656 456 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CASP3P42574 277 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR3A1P47881 315 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC6A8P48029 635 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DNASE1L1P49184 302 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 BCAP31P51572 246 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 P2RX1P51575 399 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 POLR2HP52434 150 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CAPZA1P52907 286 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 EMP2P54851 167 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CLDN12P56749 244 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CLDN17P56750 224 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MLF1P58340 268 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 KRTAP12-4P60329 112 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RPL27P61353 136 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 COPZ1P61923 177 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ACTA2P62736 377 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ACTG2P63267 376 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ACTC1P68032 377 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ACTA1P68133 377 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DCDP81605 110 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 BDH1Q02338 343 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SELENBP1Q13228 472 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 BIKQ13323 160 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TMED1Q13445 227 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 GPR50Q13585 617 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 C1DQ13901 141 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR7A5Q15622 319 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CARTPTQ16568 116 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ACKR1Q16570 336 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SGCBQ16585 318 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CLPPQ16740 277 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ZSWIM7Q19AV6 140 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ISXQ2M1V0 245 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF181Q2M3W8 571 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RGS21Q2M5E4 152 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF528Q3MIS6 628 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 FAM106AQ4KMX7 169 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC22A6Q4U2R8 563 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM255AQ5JRV8 349 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 NHLRC3Q5JS37 347 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF506Q5JVG8 444 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PHYHD1Q5SRE7 291 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 HES3Q5TGS1 186 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PRAMEF20Q5VT98 475 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 C1orf140Q5VVS0 124 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SHEQ5VZ18 495 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 HBMQ6B0K9 141 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RPL13AP3Q6NVV1 102 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 C3orf33Q6P1S2 294 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SFXN4Q6P4A7 337 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 C16orf87Q6PH81 154 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PAMR1Q6UXH9 720 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 LRRN1Q6UXK5 716 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TMPRSS11AQ6ZMR5 421 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DPY19L2P2Q6ZN68 376 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 LINC00299Q6ZSB3 139 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC35D2Q76EJ3 337 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 GDPD3Q7L5L3 318 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DPY19L4Q7Z388 723 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 GRINAQ7Z429 371 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 GLRX5Q86SX6 157 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 YRDCQ86U90 279 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC22A16Q86VW1 577 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 LYPD6Q86Y78 171 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SYS1Q8N2H4 156 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms