RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 ARL6IP6Q8N6S5 226 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 SLC35G3Q8N808 338 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 LRTM2Q8N967 370 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 OR14L1PQ8NHC6 308 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 MOB3AQ96BX8 217 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 FOXB1Q99853 325 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 SF3B5Q9BWJ5 86 aaKnown RBP9.44□□□□□ -0.9
C9orf3-214ENST00000473778 OR2H1Q9GZK4 316 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 OPA3Q9H6K4 179 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 SIT1Q9Y3P8 196 aa9.44□□□□□ -0.9
C9orf3-214ENST00000473778 A0A1W2PPE3 182 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 E5RGE8 158 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 NTN3O00634 580 aaPredicted RBP9.43□□□□□ -0.9
C9orf3-214ENST00000473778 SPINK2P20155 84 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 RAB2AP61019 212 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 EIF5AP63241 154 aaKnown RBP9.43□□□□□ -0.9
C9orf3-214ENST00000473778 ZNF616Q08AN1 781 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 OR8B8Q15620 311 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 LHFPL2Q6ZUX7 228 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 AAED1Q7RTV5 226 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 ZNF561Q8N587 486 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 OR10D3Q8NH80 312 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 PIGCQ92535 297 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 NAT6Q93015 286 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 ISOC2Q96AB3 205 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 C20orf24Q9BUV8 137 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 TMPRSS5Q9H3S3 457 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 PLEKHA2Q9HB19 425 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 IL36RNQ9UBH0 155 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 KCNIP3Q9Y2W7 256 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 NSG2Q9Y328 171 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 PHF1O43189 567 aaPredicted RBP9.43□□□□□ -0.9
C9orf3-214ENST00000473778 CFIP05156 583 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 MMP7P09237 267 aaPredicted RBP9.43□□□□□ -0.9
C9orf3-214ENST00000473778 NDUFB7P17568 137 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 UCP2P55851 309 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 RBM11P57052 281 aaKnown RBP9.43□□□□□ -0.9
C9orf3-214ENST00000473778 SPCS3P61009 180 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 ZFP36L1Q07352 338 aaKnown RBP9.43□□□□□ -0.9
C9orf3-214ENST00000473778 MEX3BQ6ZN04 569 aaKnown RBP9.43□□□□□ -0.9
C9orf3-214ENST00000473778 C15orf54Q8N8G6 183 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 HSD17B11Q8NBQ5 300 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 CPT1CQ8TCG5 803 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 C14orf144Q96I85 54 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 GGACTQ9BVM4 153 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 AHCTF1Q8WYP5 2266 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 DNAJC13O75165 2243 aa9.43□□□□□ -0.9
C9orf3-214ENST00000473778 COL27A1Q8IZC6 1860 aaPredicted RBP9.43□□□□□ -0.9
C9orf3-214ENST00000473778 FAM186AA6NE01 2351 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 A0A1B0GV50 99 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 OR7C1O76099 320 aaPredicted RBP9.42□□□□□ -0.9
C9orf3-214ENST00000473778 CCL2P13500 99 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 ZNF14P17017 642 aaPredicted RBP9.42□□□□□ -0.9
C9orf3-214ENST00000473778 TCN2P20062 427 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 SRD5A2P31213 254 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 P2RY1P47900 373 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 ESPL1Q14674 2120 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 PLCXD3Q63HM9 321 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 ABLIM2Q6H8Q1 611 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 FBXW12Q6X9E4 464 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 SLC25A26Q70HW3 274 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 ZNF611Q8N823 705 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 CCDC54Q8NEL0 328 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 OR4D5Q8NGN0 318 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 CPNE4Q96A23 557 aaPredicted RBP9.42□□□□□ -0.9
C9orf3-214ENST00000473778 C14orf79Q96F83 325 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 EGLN1Q9GZT9 426 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 BCO1Q9HAY6 547 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 SMCO4Q9NRQ5 59 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 PRRC2CQ9Y520 2896 aaKnown RBP9.42□□□□□ -0.9
C9orf3-214ENST00000473778 ZNF503-AS2A6NEH8 195 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 PDCD6O75340 191 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 TSPAN15O95858 294 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 PPYP01298 95 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 OR8U8P0C7N1 319 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 SEC11BP0C7V7 166 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 GNRHRP30968 328 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 PPP1CCP36873 323 aaKnown RBP9.42□□□□□ -0.9
C9orf3-214ENST00000473778 FOXG1P55316 489 aaPredicted RBP9.42□□□□□ -0.9
C9orf3-214ENST00000473778 GUK1Q16774 197 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 C21orf62-AS1Q17RA5 79 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 AWAT1Q58HT5 328 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 PPP1R32Q7Z5V6 425 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 ODF3L1Q8IXM7 274 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 SUMF1Q8NBK3 374 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 RNASE11Q8TAA1 199 aaKnown RBP9.42□□□□□ -0.9
C9orf3-214ENST00000473778 HIST1H2BAQ96A08 127 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 RHOVQ96L33 236 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 SSX3Q99909 188 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 ABHD14AQ9BUJ0 271 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 RSRP1Q9BUV0 290 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 SUCNR1Q9BXA5 334 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 GPR35Q9HC97 309 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 FAM212BQ9NTI7 297 aaPredicted RBP9.42□□□□□ -0.9
C9orf3-214ENST00000473778 IL36GQ9NZH8 169 aa9.42□□□□□ -0.9
C9orf3-214ENST00000473778 NKX2-6A6NCS4 301 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms