RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MYH4Q9Y623 1939 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 COL4A2P08572 1712 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 MKI67P46013 3256 aaKnown RBP1.9□□□□□ -2.1
XRN1-210ENST00000472697 IGHV7-81A0A0B4J1V7 117 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 IGHV2OR16-5A0A0B4J2B6 119 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 KLF18A0A0U1RQI7 1052 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 PLAC8L1A1L4L8 177 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 TMEM210A6NLX4 147 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 MAGEB4O15481 346 aaPredicted RBP1.9□□□□□ -2.1
XRN1-210ENST00000472697 EPPINO95925 133 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 HPRT1P00492 218 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 SEMG1P04279 462 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 HPNP05981 417 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 SNHG28P0DPA3 235 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 RAB38P57729 211 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 CXCR4P61073 352 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 ERVS71-1P61550 626 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 CEACAM21Q3KPI0 293 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 DNAL1Q4LDG9 190 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 MESTQ5EB52 335 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 SDHAF4Q5VUM1 108 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 UBE2UQ5VVX9 321 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 MOB1BQ7L9L4 216 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 TMEM179BQ7Z7N9 219 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 SPICQ8N5J4 248 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 DRAM1Q8N682 238 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 TET1Q8NFU7 2136 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 OR6N1Q8NGY5 312 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 BLNKQ8WV28 456 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 RGP1Q92546 391 aaPredicted RBP1.9□□□□□ -2.1
XRN1-210ENST00000472697 ANP32BQ92688 251 aaKnown RBP1.9□□□□□ -2.1
XRN1-210ENST00000472697 PTH2Q96A98 100 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 CCDC42Q96M95 316 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 HIST1H4GQ99525 98 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 HDHD3Q9BSH5 251 aaPredicted RBP1.9□□□□□ -2.1
XRN1-210ENST00000472697 CALN1Q9BXU9 219 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 SELENOIQ9C0D9 397 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 OR51V1Q9H2C8 321 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 TMEM27Q9HBJ8 222 aa1.9□□□□□ -2.1
XRN1-210ENST00000472697 PRUNE2Q8WUY3 3088 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 PLIN4Q96Q06 1357 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 PLXND1Q9Y4D7 1925 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 PLXNB1O43157 2135 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 TEP1Q99973 2627 aaKnown RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 TMEM114B3SHH9 223 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 DYNC1I1O14576 645 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 CDC40O60508 579 aaKnown RBP eCLIP1.9□□□□□ -2.11
XRN1-210ENST00000472697 LYPLA1O75608 230 aaPredicted RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 IFNA6P05013 189 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 P0C879 139 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 INAFM2P0DMQ5 153 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 CD28P10747 220 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 TDGF1P13385 188 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 ICAM2P13598 275 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 GABRA1P14867 456 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 PVALBP20472 110 aaPredicted RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 CMC4P56277 68 aaPredicted RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 DSTNP60981 165 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 RAB8AP61006 207 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 RANP62826 216 aaKnown RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 PRDX1Q06830 199 aaKnown RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 INCA1Q0VD86 236 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 PDK2Q15119 407 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 LRRC75BQ2VPJ9 315 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 HLA-DRB5Q30154 266 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 C11orf71Q6IPW1 123 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 TPGS1Q6ZTW0 290 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 C10orf107Q8IVU9 208 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 Q8N9P0 234 aaPredicted RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 OR5L1Q8NGL2 311 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 OR2G3Q8NGZ4 309 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 OR1P1Q8NH06 330 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 HAVCR2Q8TDQ0 301 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 SRSF12Q8WXF0 261 aaKnown RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 KLK6Q92876 244 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 RAB8BQ92930 207 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 SMIM19Q96E16 107 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 KCNS1Q96KK3 526 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 FGF23Q9GZV9 251 aaPredicted RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 METTL9Q9H1A3 318 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 VAPAQ9P0L0 249 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 FLVCR1Q9Y5Y0 555 aa1.9□□□□□ -2.11
XRN1-210ENST00000472697 FLNBO75369 2602 aaKnown RBP1.9□□□□□ -2.11
XRN1-210ENST00000472697 TNRC6BQ9UPQ9 1833 aaKnown RBP1.89□□□□□ -2.11
XRN1-210ENST00000472697 CCDC171Q6TFL3 1326 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 MUC22E2RYF6 1773 aaPredicted RBP1.89□□□□□ -2.11
XRN1-210ENST00000472697 A0A0A6YYH2 397 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 TRAV8-6A0A0B4J262 113 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 A6NJ64 397 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 ZFP92A6NM28 416 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 RAD1O60671 282 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 KCNK2O95069 426 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 THY1P04216 161 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 OR5AL1P0C617 328 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 TCN2P20062 427 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 PFN2P35080 140 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 PPOXP50336 477 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 SERPINB9P50453 376 aa1.89□□□□□ -2.11
XRN1-210ENST00000472697 TAS2R60P59551 318 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms