RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 GOLPH3Q9H4A6 298 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 POMKQ9H5K3 350 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 METTL8Q9H825 291 aaKnown RBP1.75□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF586Q9NXT0 402 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 CYB5R1Q9UHQ9 305 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF230Q9UIE0 474 aaPredicted RBP1.75□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF443Q9Y2A4 671 aaPredicted RBP1.75□□□□□ -2.13
PTCD3-209ENST00000472044 USH1CQ9Y6N9 552 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 A8MWP4 228 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 F5H5P2 479 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 PLPP3O14495 311 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ENSAO43768 121 aaKnown RBP1.74□□□□□ -2.13
PTCD3-209ENST00000472044 CST4P01036 141 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 IGKV1D-33P01593 117 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 IGKV1-33P01594 117 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 IGHMP01871 453 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 GIMD1P0DJR0 217 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 CGB3P0DN86 165 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 CGB7P0DN87 165 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 PRPS1L1P21108 318 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ETV1P50549 477 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 TNNC1P63316 161 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 TNFRSF9Q07011 255 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF141Q15928 474 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 KRTAP25-1Q3LHN0 102 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ACTBL2Q562R1 376 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 PYDC2Q56P42 97 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 AADACL4Q5VUY2 407 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 HBMQ6B0K9 141 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 DPPA2Q7Z7J5 298 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 PDCL2Q8N4E4 241 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 TRIML2Q8N7C3 387 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 C2orf15Q8WU43 125 aaKnown RBP1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ZCCHC13Q8WW36 166 aaKnown RBP1.74□□□□□ -2.13
PTCD3-209ENST00000472044 APOBEC3DQ96AK3 386 aaPredicted RBP1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ZMYND19Q96E35 227 aaPredicted RBP1.74□□□□□ -2.13
PTCD3-209ENST00000472044 C19orf60Q96EN9 201 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF75AQ96N20 296 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 SUCNR1Q9BXA5 334 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 PRRG3Q9BZD7 231 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF436Q9C0F3 470 aaPredicted RBP1.74□□□□□ -2.13
PTCD3-209ENST00000472044 DSN1Q9H410 356 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 HAUS4Q9H6D7 363 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 TMBIM4Q9HC24 238 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 NXT1Q9UKK6 140 aaKnown RBP1.74□□□□□ -2.13
PTCD3-209ENST00000472044 MCTS1Q9ULC4 181 aaKnown RBP1.74□□□□□ -2.13
PTCD3-209ENST00000472044 STK38LQ9Y2H1 464 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 ARAP3Q8WWN8 1544 aa1.74□□□□□ -2.13
PTCD3-209ENST00000472044 POLR3AO14802 1390 aaPredicted RBP1.73□□□□□ -2.13
PTCD3-209ENST00000472044 TRAV8-3A0A0A6YYJ7 113 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 LOC100506127A0A0U1RQW1 187 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 GGTLC3B5MD39 225 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 CDIPTO14735 213 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 UBDO15205 165 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 SLC31A1O15431 190 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 AQP9O43315 295 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 CA2P00918 260 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 APOA1P02647 267 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 SLC2A1P11166 492 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 GTF2F2P13984 249 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 RPA3P35244 121 aaPredicted RBP1.73□□□□□ -2.13
PTCD3-209ENST00000472044 KCNJ3P48549 501 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF83P51522 516 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 CASP8Q14790 479 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 GOLGA7BQ2TAP0 167 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 Q3ZCU0 254 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 TCF24Q7RTU0 167 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 LRP11Q86VZ4 500 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 KRTAP13-1Q8IUC0 172 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 EIF4E3Q8N5X7 224 aaKnown RBP1.73□□□□□ -2.13
PTCD3-209ENST00000472044 CDRT4Q8N9R6 151 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 OR2AE1Q8NHA4 323 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 TMEM239Q8WW34 195 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 OTUB2Q96DC9 234 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 IGF2BP2-AS1Q96M15 143 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 ANAPC13Q9BS18 74 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 MAT2BQ9NZL9 334 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 FADS3Q9Y5Q0 445 aa1.73□□□□□ -2.13
PTCD3-209ENST00000472044 IGHV2-26A0A0B4J1V2 119 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 A0A1B0GW15 77 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 F8VP50 259 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 M0QXV9 152 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 TCF21O43680 179 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 SYNGR2O43760 224 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 SHOX2O60902 331 aaPredicted RBP1.72□□□□□ -2.13
PTCD3-209ENST00000472044 PDCD6O75340 191 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 POP7O75817 140 aaKnown RBP1.72□□□□□ -2.13
PTCD3-209ENST00000472044 PDYNP01213 254 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 IGKV5-2P06315 115 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 TPM1P09493 284 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 TSPOP30536 169 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 TGFBR2P37173 567 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 PLTPP55058 493 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 CD164Q04900 197 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 DHRS2Q13268 280 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 CEACAM21Q3KPI0 293 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 LAMTOR1Q6IAA8 161 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 SLC25A45Q8N413 288 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 ZIC4Q8N9L1 334 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms