RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 KRTAP10-3P60369 221 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 IL24Q13007 206 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 GPR176Q14439 515 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 CD276Q5ZPR3 534 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 RUSC1-AS1Q66K80 236 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 HAGHLQ6PII5 290 aaPredicted RBP7.48□□□□□ -1.21
SF3A1-206ENST00000471037 ASCL4Q6XD76 172 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 LINC00299Q6ZSB3 139 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 OR2W3Q7Z3T1 314 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 WDR86Q86TI4 376 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 ANGPTL5Q86XS5 388 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 LDLRAD3Q86YD5 345 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 MKXQ8IYA7 352 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 SAXO1Q8IYX7 474 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 OR5D18Q8NGL1 313 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 OR11L1Q8NGX0 322 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 LINC01006Q8NI28 216 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 LGALS14Q8TCE9 139 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 FAM3DQ96BQ1 224 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 CMTM3Q96MX0 182 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 TBX15Q96SF7 602 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 S100A13Q99584 98 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 C6orf62Q9GZU0 229 aaPredicted RBP7.48□□□□□ -1.21
SF3A1-206ENST00000471037 CST11Q9H112 138 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 TLNRD1Q9H1K6 362 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 RHOFQ9HBH0 211 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 PCDHB16Q9NRJ7 776 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 IL36GQ9NZH8 169 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 CTSZQ9UBR2 303 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 FBLN5Q9UBX5 448 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 ADAM30Q9UKF2 790 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 SPATA2Q9UM82 520 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 RNF114Q9Y508 228 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 WNK1Q9H4A3 2382 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 A6NLC8 198 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 GPR137BO60478 399 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 TOX4O94842 621 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 PAHP00439 452 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 GRPP07492 148 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 SFTPBP07988 381 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 ACAA1P09110 424 aaPredicted RBP7.47□□□□□ -1.21
SF3A1-206ENST00000471037 SNRPBP14678 240 aaKnown RBP7.47□□□□□ -1.21
SF3A1-206ENST00000471037 RAB6AP20340 208 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 BMXP51813 675 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 CLDN12P56749 244 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 PROK1P58294 105 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 P2RY14Q15391 338 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 KCNJ8Q15842 424 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 FAM189A2Q15884 450 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 TAF9Q16594 264 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 C11orf91Q3C1V1 193 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 GLIPR1L1Q6UWM5 242 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 SLC25A26Q70HW3 274 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 RNF144BQ7Z419 303 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 CALHM1Q8IU99 346 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 SCCPDHQ8NBX0 429 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 OR51D1Q8NGF3 324 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 KCNG3Q8TAE7 436 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 AQP3Q92482 292 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 PTX4Q96A99 478 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 WDFY2Q96P53 400 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 NKX3-1Q99801 234 aaPredicted RBP7.47□□□□□ -1.21
SF3A1-206ENST00000471037 PCGF1Q9BSM1 259 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 SIRPDQ9H106 197 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 METTL9Q9H1A3 318 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 FN3KRPQ9HA64 309 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 TNFRSF19Q9NS68 423 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 COMMD3Q9UBI1 195 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 ING4Q9UNL4 249 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 PEX16Q9Y5Y5 336 aa7.47□□□□□ -1.21
SF3A1-206ENST00000471037 A0A0B4J203 849 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 IGHV1-69DA0A0B4J2H0 117 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 TMEM272A0A1B0GTI8 110 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 TMEM14DPA8MWL7 114 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 LGALS8O00214 317 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 LDLRAD4O15165 306 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 RGS5O15539 181 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 NDUFA2O43678 99 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 NOS1APO75052 506 aaPredicted RBP7.46□□□□□ -1.22
SF3A1-206ENST00000471037 KDM4BO94953 1096 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 IGHV1-69P01742 117 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 APOA1P02647 267 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 CSTBP04080 98 aaKnown RBP7.46□□□□□ -1.22
SF3A1-206ENST00000471037 VSIG8P0DPA2 414 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 S100A5P33763 92 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 IER3P46695 156 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 QRFPP83859 136 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 RSU1Q15404 277 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 MPPED2Q15777 294 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 C2orf76Q3KRA6 126 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 SLC22A6Q4U2R8 563 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 UBE2NLQ5JXB2 153 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 METTL11BQ5VVY1 283 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 PRAMEF6Q5VXH4 476 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 Q8IYB0 196 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 SAMD12Q8N8I0 201 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 POC1AQ8NBT0 407 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 C19orf18Q8NEA5 215 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 Q8NFD4 153 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 OR10Z1Q8NGY1 313 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms