RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TMEM178BH3BS89 294 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 NAPSAO96009 420 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 SOD3P08294 240 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 PSG2P11465 335 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 PRDX2P32119 198 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 GMFBP60983 142 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 MEF2DQ14814 521 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 MICBQ29980 383 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 ACTBL2Q562R1 376 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 PAN3Q58A45 887 aaKnown RBP12.7□□□□□ -0.38
COL4A5-203ENST00000470339 STEAP1BQ6NZ63 245 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 BRICD5Q6PL45 260 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 DCDC5Q6ZRR9 648 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 Q6ZS49 121 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 CENPSQ8N2Z9 138 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 DUSP18Q8NEJ0 188 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 TMEM106BQ9NUM4 274 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 COPZ2Q9P299 210 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 OR14J1Q9UGF5 321 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 LRRK2Q5S007 2527 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 FAM240BA0A1B0GVZ2 78 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 CLDN1O95832 211 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 CYB5R3P00387 301 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-203ENST00000470339 HPXP02790 462 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 FCGR3AP08637 254 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 SLC6A1P30531 599 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 PAX5Q02548 391 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 SP5Q6BEB4 398 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-203ENST00000470339 C20orf204Q6ZNR8 217 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 NRARPQ7Z6K4 114 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 GAPTQ8N292 157 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 GVQW1Q8N7I0 195 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 ANGPTL6Q8NI99 470 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 RDH5Q92781 318 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 DNTTIP1Q9H147 329 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 UBTD1Q9HAC8 227 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 DLL4Q9NR61 685 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 ETAA1Q9NY74 926 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
COL4A5-203ENST00000470339 IGKV1D-17A0A075B6S4 117 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 TRAV38-1A0A0B4J264 116 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 OOEPA6NGQ2 149 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 LGALS8O00214 317 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 SIRPB1O00241 398 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 RAB3DO95716 219 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 CD3DP04234 171 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 CSN2P05814 226 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 COX6B1P14854 86 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 TAS2R46P59540 309 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 HFEQ30201 348 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 ATPAF1Q5TC12 328 aaPredicted RBP12.68□□□□□ -0.38
COL4A5-203ENST00000470339 STUMQ69YW2 141 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 ZNF497Q6ZNH5 498 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 Q6ZNX1 250 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 BOLLQ8N9W6 283 aaKnown RBP12.68□□□□□ -0.38
COL4A5-203ENST00000470339 BEST4Q8NFU0 473 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 OR4K15Q8NH41 348 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 PPP1R35Q8TAP8 253 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 ENKURQ8TC29 256 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 NEK7Q8TDX7 302 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 SNAPC3Q92966 411 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 SDSLQ96GA7 329 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 ST6GALNAC5Q9BVH7 336 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 CACNG6Q9BXT2 260 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 TMEM165Q9HC07 324 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 COL12A1Q99715 3063 aa12.68□□□□□ -0.38
COL4A5-203ENST00000470339 PPIAL4EA0A075B759 164 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 PPIAL4DF5H284 164 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 MT-ND4P03905 459 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 PPIAL4FP0DN26 164 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 AMY2BP19961 511 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 HLA-DMAP28067 261 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 CD80P33681 288 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 BTCP35070 178 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 COL10A1Q03692 680 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 KCNJ8Q15842 424 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 PLA1AQ53H76 456 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 RNASE10Q5GAN6 216 aaKnown RBP12.67□□□□□ -0.38
COL4A5-203ENST00000470339 VAX1Q5SQQ9 334 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 SLC35E4Q6ICL7 350 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 ZNF880Q6PDB4 577 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 CCBE1Q6UXH8 406 aaPredicted RBP12.67□□□□□ -0.38
COL4A5-203ENST00000470339 BPIFB2Q8N4F0 458 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 OR5AP2Q8NGF4 316 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 OR4C16Q8NGL9 310 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 CCL17Q92583 94 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 CYYR1Q96J86 154 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 SNX22Q96L94 193 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 HDHD3Q9BSH5 251 aaPredicted RBP12.67□□□□□ -0.38
COL4A5-203ENST00000470339 DPAGT1Q9H3H5 408 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 PLEKHF2Q9H8W4 249 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 ZNF701Q9NV72 531 aaPredicted RBP12.67□□□□□ -0.38
COL4A5-203ENST00000470339 MGAT4AQ9UM21 535 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 LAMP3Q9UQV4 416 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 PPIAL4AQ9Y536 164 aa12.67□□□□□ -0.38
COL4A5-203ENST00000470339 DCHS2Q6V1P9 2916 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms