RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ADAD2Q8NCV1 583 aaKnown RBP4.42□□□□□ -1.7
COL3A1-205ENST00000470167 OR4C3Q8NH37 302 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 NEIL3Q8TAT5 605 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 PSMF1Q92530 271 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF681Q96N22 645 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 SMIM3Q9BZL3 60 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ATG5Q9H1Y0 275 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 BANF2Q9H503 90 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 RDH14Q9HBH5 336 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 APOBEC3GQ9HC16 384 aaKnown RBP4.42□□□□□ -1.7
COL3A1-205ENST00000470167 IL23AQ9NPF7 189 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 FSCN3Q9NQT6 498 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 CA10Q9NS85 328 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 TOPAZ1Q8N9V7 1692 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 PARP4Q9UKK3 1724 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 IGHV2-26A0A0B4J1V2 119 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM129A0AVI4 362 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 hADV38S2A0JD32 116 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 GGT3PA6NGU5 568 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 UNC119BA6NIH7 251 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 LRRC3CA6NJW4 275 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 C2CD4BA6NLJ0 364 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 B4DGG1 531 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 F8VVB4 439 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 F8VWA3 439 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 J3KT08 172 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 SAP18O00422 153 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF593O00488 134 aaPredicted RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 TAX1BP3O14907 124 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 KBTBD11O94819 623 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 KLF8O95600 359 aaPredicted RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CSN2P05814 226 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 NGFRP08138 427 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CHRM4P08173 479 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 FCGR3AP08637 254 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CT45A6P0DMU7 189 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CT45A5P0DMU8 189 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CT45A7P0DMV0 189 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CTSEP14091 401 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 TCN2P20062 427 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 PSMB1P20618 241 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 GLRXP35754 106 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 OR1D4P47884 311 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 MEOX1P50221 254 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 HNRNPA3P51991 378 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM50BP56557 158 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 TAS2R31P59538 309 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 UBE2NP61088 152 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 RPL27P61353 136 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 LCN6P62502 163 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 TNFAIP6P98066 277 aaPredicted RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF415Q09FC8 603 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 MALLQ13021 153 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 ELOBQ15370 118 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 TGIF1Q15583 401 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 RPEL1Q2QD12 228 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 LINC01620Q4KN68 170 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF385BQ569K4 471 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 VWA2Q5GFL6 755 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CT45A1Q5HYN5 189 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CLEC12AQ5QGZ9 265 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 C1orf220Q5T0J3 134 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CNIH2Q6PI25 160 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 ARL9Q6T311 187 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF730Q6ZMV8 503 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 FAM19A5Q7Z5A7 132 aaPredicted RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF440Q8IYI8 595 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 GPR135Q8IZ08 494 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 TTC9CQ8N5M4 171 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 DEFB125Q8N687 156 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 SYT8Q8NBV8 401 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 OR10V1Q8NGI7 309 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 OR5A1Q8NGJ0 315 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 OR51A2Q8NGJ7 313 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 OR6T1Q8NGN1 323 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 OR2I1PQ8NGU4 316 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 OR2G3Q8NGZ4 309 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CT45A3Q8NHU0 189 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 FRZBQ92765 325 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 POP5Q969H6 163 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 MYADMQ96S97 322 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 VAMP8Q9BV40 100 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 SAMD10Q9BYL1 202 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 NPFFR1Q9GZQ6 430 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 COA1Q9GZY4 146 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 POLR2J3Q9H1A7 115 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 MAP1LC3AQ9H492 121 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 PRORYQ9H606 182 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 BPIFA1Q9NP55 256 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 SLC52A3Q9NQ40 469 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 MEPEQ9NQ76 525 aaPredicted RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF226Q9NYT6 803 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 CYSLTR1Q9Y271 337 aa4.41□□□□□ -1.7
COL3A1-205ENST00000470167 NUP153P49790 1475 aaKnown RBP4.41□□□□□ -1.7
COL3A1-205ENST00000470167 PLIN4Q96Q06 1357 aa4.4□□□□□ -1.7
COL3A1-205ENST00000470167 RGPD8O14715 1765 aaPredicted RBP4.4□□□□□ -1.7
COL3A1-205ENST00000470167 RGPD5Q99666 1765 aa4.4□□□□□ -1.7
COL3A1-205ENST00000470167 COL22A1Q8NFW1 1626 aaPredicted RBP4.4□□□□□ -1.7
COL3A1-205ENST00000470167 TRBV24-1A0A075B6N3 115 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 A0A087X0K7 114 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms