RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 DOCK8Q8NF50 2099 aa2.01□□□□□ -2.09
BRCA2-202ENST00000470094 IGLV3-12A0A075B6K2 115 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 A0A0A6YYH2 397 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 A0A1W2PRG6 482 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 A6NJ64 397 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 CD300LBA8K4G0 201 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 KLRC4-KLRK1H3BQV0 150 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 AQP9O43315 295 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 CYTH3O43739 400 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 MPZL2O60487 215 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 PDCD6O75340 191 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 KLHL2O95198 593 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 IGKV5-2P06315 115 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 SEC11BP0C7V7 166 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 SLC2A1P11166 492 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 PSMB9P28065 219 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 MPIP34949 423 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 TGFBR1P36897 503 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 RPL14P50914 215 aaKnown RBP2□□□□□ -2.09
BRCA2-202ENST00000470094 C1QTNF8P60827 252 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 HBG1P69891 147 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 HBG2P69892 147 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 BNIP2Q12982 314 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 MED21Q13503 144 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 ELOCQ15369 112 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 SSX1Q16384 188 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 UBE2NLQ5JXB2 153 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 PRSS54Q6PEW0 395 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 DGAT2L6Q6ZPD8 337 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 USP50Q70EL3 339 aaPredicted RBP2□□□□□ -2.09
BRCA2-202ENST00000470094 LINC00596Q86U02 117 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 NT5DC3Q86UY8 548 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 PLCZ1Q86YW0 608 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 STK40Q8N2I9 435 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 MIR7-3HGQ8N6C7 128 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 ZDHHC22Q8N966 263 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 ST20-AS1Q8NBB2 130 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 RTN4IP1Q8WWV3 396 aaPredicted RBP2□□□□□ -2.09
BRCA2-202ENST00000470094 PGLYRP3Q96LB9 341 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 IP6K3Q96PC2 410 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 DERL3Q96Q80 235 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 ZNF426Q9BUY5 554 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 SPZ1Q9BXG8 430 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 ZNF717Q9BY31 904 aaPredicted RBP2□□□□□ -2.09
BRCA2-202ENST00000470094 UPF3BQ9BZI7 483 aaKnown RBP2□□□□□ -2.09
BRCA2-202ENST00000470094 SLC25A31Q9H0C2 315 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 DHX35Q9H5Z1 703 aaKnown RBP2□□□□□ -2.09
BRCA2-202ENST00000470094 METTL17Q9H7H0 456 aaPredicted RBP2□□□□□ -2.09
BRCA2-202ENST00000470094 LINC00574Q9H8X3 128 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 UCK1Q9HA47 277 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 TAS2R13Q9NYV9 303 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 NAGKQ9UJ70 344 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 HIVEP2P31629 2446 aa2□□□□□ -2.09
BRCA2-202ENST00000470094 TSPOAP1O95153 1857 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 MYBPHLA2RUH7 354 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 H3BP45 60 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 SLC31A1O15431 190 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 SYNGR1O43759 233 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 COX7A2P2O60397 106 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 RAB36O95755 333 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 CXorf1O96002 111 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 CA2P00918 260 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 RNASE2P10153 161 aaKnown RBP1.99□□□□□ -2.09
BRCA2-202ENST00000470094 PRTN3P24158 256 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 SLC6A1P30531 599 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 STC1P52823 247 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 RAB8AP61006 207 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 RHOAP61586 193 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 ZNHIT3Q15649 155 aaPredicted RBP1.99□□□□□ -2.09
BRCA2-202ENST00000470094 NIPAL1Q6NVV3 410 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 MED27Q6P2C8 311 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 CLEC18BQ6UXF7 455 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 FAM151BQ6UXP7 276 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 FAM183BPQ6ZVS7 135 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 CALHM3Q86XJ0 350 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 C10orf107Q8IVU9 208 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 OSR2Q8N2R0 312 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 LFNGQ8NES3 379 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 ATP6V1C2Q8NEY4 427 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 OR6K3Q8NGY3 331 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 DYNC2LI1Q8TCX1 351 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 DDIT4LQ96D03 193 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 WDR34Q96EX3 536 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 YPEL4Q96NS1 127 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 C7orf50Q9BRJ6 194 aaKnown RBP1.99□□□□□ -2.09
BRCA2-202ENST00000470094 FAAP24Q9BTP7 215 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 POTEKPQ9BYX7 375 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 TAC3Q9UHF0 121 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 FBXL3Q9UKT7 428 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 C2orf16Q68DN1 1984 aa1.99□□□□□ -2.09
BRCA2-202ENST00000470094 TRAV8-2A0A0B4J237 113 aa1.98□□□□□ -2.09
BRCA2-202ENST00000470094 PGPA6NDG6 321 aa1.98□□□□□ -2.09
BRCA2-202ENST00000470094 GOLGA6L10A6NI86 522 aa1.98□□□□□ -2.09
BRCA2-202ENST00000470094 CEACAM18A8MTB9 384 aa1.98□□□□□ -2.09
BRCA2-202ENST00000470094 C9J4A7 227 aa1.98□□□□□ -2.09
BRCA2-202ENST00000470094 PRAMEF26H0Y7S4 382 aa1.98□□□□□ -2.09
BRCA2-202ENST00000470094 I3L4J1 428 aa1.98□□□□□ -2.09
BRCA2-202ENST00000470094 J3QLI3 93 aa1.98□□□□□ -2.09
BRCA2-202ENST00000470094 LIN7AO14910 233 aaPredicted RBP1.98□□□□□ -2.09
BRCA2-202ENST00000470094 COCHO43405 550 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms