RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ZDHHC8Q9ULC8 765 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 TAAR5O14804 337 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 NME2P1O60361 137 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 MED6O75586 246 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 ZNF169Q14929 603 aaPredicted RBP12.58□□□□□ -0.4
CBWD3-205ENST00000469687 HERPUD1Q15011 391 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 TGIF1Q15583 401 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 RNFT1Q5M7Z0 435 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 SUCNR1Q9BXA5 334 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 PARP12Q9H0J9 701 aaKnown RBP12.58□□□□□ -0.4
CBWD3-205ENST00000469687 TLNRD1Q9H1K6 362 aa12.58□□□□□ -0.4
CBWD3-205ENST00000469687 CD300LBA8K4G0 201 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 H7C1Q1 480 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 IL18BPO95998 194 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 GNRHRP30968 328 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 UCP3P55916 312 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 IL22RA1Q8N6P7 574 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 LRTM2Q8N967 370 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 TREM1Q9NP99 234 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 AGPAT2O15120 278 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 NAPSAO96009 420 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 CST4P01036 141 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 COX5BP10606 129 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 MUC1P15941 1255 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-205ENST00000469687 PJVKQ0ZLH3 352 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-205ENST00000469687 MCEMP1Q8IX19 187 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 SECTM1Q8WVN6 248 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 WFDC1Q9HC57 220 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 Q9N2K0 584 aa12.57□□□□□ -0.4
CBWD3-205ENST00000469687 DSPP15924 2871 aaKnown RBP12.56□□□□□ -0.4
CBWD3-205ENST00000469687 IGKV1D-13A0A0B4J2D9 117 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 F8W036 122 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 IGKV1-13P0DP09 117 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 BLOC1S1P78537 153 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 SPATA46Q5T0L3 261 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 C20orf204Q6ZNR8 217 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 TMPRSS7Q7RTY8 843 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 LGI3Q8N145 548 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 USB1Q9BQ65 265 aaKnown RBP12.56□□□□□ -0.4
CBWD3-205ENST00000469687 SYT3Q9BQG1 590 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 RHOFQ9HBH0 211 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 SPRR3Q9UBC9 169 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 KLF13Q9Y2Y9 288 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-205ENST00000469687 IGKV1-6A0A0C4DH72 117 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 E5RGE8 158 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 TRAPPC2LH3BP13 241 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 MPPED1O15442 326 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 PRKACAP17612 351 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 ARR3P36575 388 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 PMELP40967 661 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 SULT1A2P50226 295 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 SLC10A1Q14973 349 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 RNPS1Q15287 305 aaKnown RBP12.56□□□□□ -0.4
CBWD3-205ENST00000469687 PRR14LQ5THK1 2151 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 FBXW12Q6X9E4 464 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 MYPOPQ86VE0 399 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-205ENST00000469687 LDLRAD3Q86YD5 345 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 C17orf78Q8N4C9 275 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 NEK7Q8TDX7 302 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 RNF122Q9H9V4 155 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 UQCC1Q9NVA1 299 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 RCC2Q9P258 522 aaKnown RBP12.56□□□□□ -0.4
CBWD3-205ENST00000469687 NSG2Q9Y328 171 aa12.56□□□□□ -0.4
CBWD3-205ENST00000469687 ARGFXA6NJG6 315 aa12.55□□□□□ -0.4
CBWD3-205ENST00000469687 KLRC4-KLRK1H3BQV0 150 aa12.55□□□□□ -0.4
CBWD3-205ENST00000469687 KCNJ3P48549 501 aa12.55□□□□□ -0.4
CBWD3-205ENST00000469687 SPIN3Q5JUX0 258 aa12.55□□□□□ -0.4
CBWD3-205ENST00000469687 IL34Q6ZMJ4 242 aa12.55□□□□□ -0.4
CBWD3-205ENST00000469687 ZNF818PQ6ZRF7 136 aa12.55□□□□□ -0.4
CBWD3-205ENST00000469687 ZFP62Q8NB50 900 aaPredicted RBP12.55□□□□□ -0.4
CBWD3-205ENST00000469687 OR5P3Q8WZ94 311 aa12.55□□□□□ -0.4
CBWD3-205ENST00000469687 SAT2Q96F10 170 aaPredicted RBP12.55□□□□□ -0.4
CBWD3-205ENST00000469687 RCL1Q9Y2P8 373 aaKnown RBP12.55□□□□□ -0.4
CBWD3-205ENST00000469687 A0A1W2PR80 420 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 NKX2-6A6NCS4 301 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A10PA6NDY2 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A18PA6NE21 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A16PA6NEW6 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A20PA6NIJ5 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A8PA6NJQ4 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A7PA6NKC0 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A22PA8MWA6 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A12PA8MX19 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A5PA8MXJ8 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A23PA8MXZ1 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 TOR1AO14656 332 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 HS3ST1O14792 307 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 RHBDL1O75783 438 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 JTBO76095 146 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 GAPDHP04406 335 aaKnown RBP12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A15PP0C7V4 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A13PP0C7W8 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A14PP0C7W9 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FAM90A24PP0C7X0 464 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 ASCL1P50553 236 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms