RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TCF23Q7RTU1 214 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 LHFPL4Q7Z7J7 247 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 CHST4Q8NCG5 386 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 OR4S1Q8NGB4 309 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 TSEN15Q8WW01 171 aaKnown RBP15.46■□□□□ 0.07
COL7A1-207ENST00000467985 NPFFR1Q9GZQ6 430 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 MMP27Q9H306 513 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 ABCB10Q9NRK6 738 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 FKBP14Q9NWM8 211 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 ERGIC3Q9Y282 383 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 GSTK1Q9Y2Q3 226 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 SESN1Q9Y6P5 492 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 IGKV1-12A0A0C4DH73 117 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 MEX3AA1L020 520 aaKnown RBP15.45■□□□□ 0.06
COL7A1-207ENST00000467985 E9PI62 339 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 SIRPB1O00241 398 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 OR2H2O95918 312 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 IGKV1D-12P01611 117 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 ETV1P50549 477 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 SNU13P55769 128 aaKnown RBP15.45■□□□□ 0.06
COL7A1-207ENST00000467985 DYNC1I2Q13409 638 aaKnown RBP15.45■□□□□ 0.06
COL7A1-207ENST00000467985 KISS1Q15726 138 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 CCDC58Q4VC31 144 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 TRAPPC6BQ86SZ2 158 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 OR5D18Q8NGL1 313 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 OR2T6Q8NHC8 308 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 PIFOQ8TCI5 191 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 SPACA5Q96QH8 159 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 PDCD1LG2Q9BQ51 273 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 GAL3ST2Q9H3Q3 398 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 PAK1IP1Q9NWT1 392 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-207ENST00000467985 PITPNC1Q9UKF7 332 aa15.45■□□□□ 0.06
COL7A1-207ENST00000467985 TRGV10A0A0A0MS01 117 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 MAGEB3O15480 346 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 LIMS3P0CW19 117 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 LIMS4P0CW20 117 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 TMEM225BP0DP42 221 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 CALCBP10092 127 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 LMO1P25800 156 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 C21orf33P30042 268 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-207ENST00000467985 MINOS1Q5TGZ0 78 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 OR52W1Q6IF63 320 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 TPRX1Q8N7U7 411 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 RPS4Y2Q8TD47 263 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 TMEM133Q9H2Q1 129 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 DUSP21Q9H596 190 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 MINOS1-NBL1R4GNA1 71 aa15.44■□□□□ 0.06
COL7A1-207ENST00000467985 CSN2P05814 226 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 ZNF44P15621 663 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 RAB3AP20336 220 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 PAX6P26367 422 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 MTNR1BP49286 362 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 DYNLT3P51808 116 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 EFNB2P52799 333 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 FAM189A2Q15884 450 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 SSX2Q16385 188 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 C2orf68Q2NKX9 166 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 KCTD21Q4G0X4 260 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 RPL22L1Q6P5R6 122 aaKnown RBP15.43■□□□□ 0.06
COL7A1-207ENST00000467985 PRSS48Q7RTY5 328 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 SVOPQ8N4V2 548 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 SGCDQ92629 289 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 MND1Q9BWT6 205 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 CLEC7AQ9BXN2 247 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 TAS2R3Q9NYW6 316 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 TGP01266 2768 aa15.43■□□□□ 0.06
COL7A1-207ENST00000467985 IGHV2-26A0A0B4J1V2 119 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 H3BUI4 141 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 CD2P06729 351 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 ZP1P60852 638 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 SCN1BQ07699 218 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 Q6ZTK2 550 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 RNF144BQ7Z419 303 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 DYNAPQ8N1N2 210 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 PXT1Q8NFP0 134 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 OR52N1Q8NH53 320 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 GPR148Q8TDV2 347 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 CORO2AQ92828 525 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 NR1H4Q96RI1 486 aaPredicted RBP15.42■□□□□ 0.06
COL7A1-207ENST00000467985 CLEC2DQ9UHP7 191 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 TCF19Q9Y242 345 aa15.42■□□□□ 0.06
COL7A1-207ENST00000467985 A0A0G2JK05 382 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 DEGS1O15121 323 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 WIPF1O43516 503 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 CHST1O43916 411 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 MRPS14O60783 128 aaKnown RBP15.41■□□□□ 0.06
COL7A1-207ENST00000467985 GTF2A1P52655 376 aaPredicted RBP15.41■□□□□ 0.06
COL7A1-207ENST00000467985 HERPUD1Q15011 391 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 PLA1AQ53H76 456 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 OR2G6Q5TZ20 316 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 ELP2Q6IA86 826 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 ZNF529Q6P280 563 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 HEPN1Q6WQI6 88 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 RTN4RL2Q86UN3 420 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 NDNFQ8TB73 568 aa15.41■□□□□ 0.06
COL7A1-207ENST00000467985 ODAMA1E959 279 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 F2RL2O00254 374 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 SLC33A1O00400 549 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-207ENST00000467985 HTR1DP28221 377 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 WNT4P56705 351 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms