RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 SLC6A1P30531 599 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 LUMP51884 338 aaPredicted RBP11.44□□□□□ -0.58
CXCR4-203ENST00000466288 EDDM3BP56851 147 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 PSMA6P60900 246 aaKnown RBP11.44□□□□□ -0.58
CXCR4-203ENST00000466288 SHFQ7M4L6 423 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.44□□□□□ -0.58
CXCR4-203ENST00000466288 CROCCP3Q8IVE0 287 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 BATF2Q8N1L9 274 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 TCEANCQ8N8B7 351 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 FGF20Q9NP95 211 aaPredicted RBP11.44□□□□□ -0.58
CXCR4-203ENST00000466288 ISYNA1Q9NPH2 558 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 ZFP57Q9NU63 452 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 TVP23BQ9NYZ1 205 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 DIMT1Q9UNQ2 313 aaKnown RBP11.44□□□□□ -0.58
CXCR4-203ENST00000466288 SLC22A13Q9Y226 551 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
CXCR4-203ENST00000466288 J3QT63 122 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 DBTP11182 482 aaKnown RBP11.43□□□□□ -0.58
CXCR4-203ENST00000466288 MAP2K4P45985 399 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 HAAOP46952 286 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 SERPINB10P48595 397 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 CTF1Q16619 201 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 PLCXD3Q63HM9 321 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 KCTD18Q6PI47 426 aaPredicted RBP11.43□□□□□ -0.58
CXCR4-203ENST00000466288 SLC16A12Q6ZSM3 486 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 GID4Q8IVV7 300 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 ZNF676Q8N7Q3 588 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 RCHY1Q96PM5 261 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 DUX3Q96PT4 197 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 IL4I1Q96RQ9 567 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 MND1Q9BWT6 205 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 TSSK6Q9BXA6 273 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 CLEC7AQ9BXN2 247 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 MED20Q9H944 212 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 CHCHD3Q9NX63 227 aaKnown RBP11.43□□□□□ -0.58
CXCR4-203ENST00000466288 AASSQ9UDR5 926 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 HHLA2Q9UM44 414 aa11.43□□□□□ -0.58
CXCR4-203ENST00000466288 A0A0U1RQV5 110 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 SNRNP70P08621 437 aaKnown RBP11.42□□□□□ -0.58
CXCR4-203ENST00000466288 C21orf33P30042 268 aaPredicted RBP11.42□□□□□ -0.58
CXCR4-203ENST00000466288 BRS3P32247 399 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 ZNF91Q05481 1191 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 MEF2CQ06413 473 aaPredicted RBP11.42□□□□□ -0.58
CXCR4-203ENST00000466288 NXNL2Q5VZ03 156 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 GDPD3Q7L5L3 318 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 ZNF573Q86YE8 665 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 ASCC1Q8N9N2 400 aaKnown RBP11.42□□□□□ -0.58
CXCR4-203ENST00000466288 KLHL30-AS1Q8NEE0 82 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 OTOSQ8NHW6 89 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 JAM3Q9BX67 310 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 DPM3Q9P2X0 92 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 EXOSC1Q9Y3B2 195 aaKnown RBP11.42□□□□□ -0.58
CXCR4-203ENST00000466288 A3GALT2U3KPV4 340 aa11.42□□□□□ -0.58
CXCR4-203ENST00000466288 FAM183AA6NL82 134 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 NUDT19A8MXV4 375 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 PRKYO43930 277 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 MMP23AO75900 390 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 IGLV3-1P01715 115 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 CD36P16671 472 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 OR3A4PP47883 348 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 ERVK11-1P61568 191 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 RIPPLY1Q0D2K3 151 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 PLBD1Q6P4A8 553 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 OR8H2Q8N162 312 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 THEM6Q8WUY1 208 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 ITFG2Q969R8 447 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 RAX2Q96IS3 184 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 NIPAL2Q9H841 368 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 PALMDQ9NP74 551 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 H2AFY2Q9P0M6 372 aaPredicted RBP11.41□□□□□ -0.58
CXCR4-203ENST00000466288 POLDIP2Q9Y2S7 368 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 KLHDC2Q9Y2U9 406 aa11.41□□□□□ -0.58
CXCR4-203ENST00000466288 hADV38S2A0JD32 116 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 M0QZK8 103 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 CCRL2O00421 344 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 IFNGP01579 166 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 MYL12AP19105 171 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 MPZP25189 248 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 HTR1FP30939 366 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 ECI1P42126 302 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 BDH1Q02338 343 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 AADACL4Q5VUY2 407 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 BAIAP2L2Q6UXY1 529 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 EGFL6Q8IUX8 553 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 SBSPONQ8IVN8 264 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 NANOGP1Q8N7R0 232 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 LGALS12Q96DT0 336 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 NOL4LQ96MY1 436 aaPredicted RBP11.4□□□□□ -0.58
CXCR4-203ENST00000466288 MGLLQ99685 303 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 NAA50Q9GZZ1 169 aaKnown RBP11.4□□□□□ -0.58
CXCR4-203ENST00000466288 AMBNQ9NP70 447 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 CMC2Q9NRP2 79 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 PIGLQ9Y2B2 252 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 LINC00312Q9Y6C7 94 aa11.4□□□□□ -0.58
CXCR4-203ENST00000466288 TMEM82A0PJX8 343 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 PQLC2LA1A4F0 135 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 RIIAD1A6NNX1 92 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 CCL24O00175 119 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms