RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 KCNJ3P48549 501 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 TTPAP49638 278 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 NUDT2P50583 147 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 XKP51811 444 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 DSTNP60981 165 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 STX4Q12846 297 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 BIKQ13323 160 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 IHHQ14623 411 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 DEFB134Q4QY38 66 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 ERICH5Q6P6B1 374 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 ZIC4Q8N9L1 334 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 OR2AE1Q8NHA4 323 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 CLHC1Q8NHS4 586 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 LRRC20Q8TCA0 184 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 OR5P2Q8WZ92 322 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 SIKE1Q9BRV8 207 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 COPS4Q9BT78 406 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 ZNF436Q9C0F3 470 aaPredicted RBP1.61□□□□□ -2.15
SMC4-205ENST00000465563 TXNIPQ9H3M7 391 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 SLC22A14Q9Y267 594 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 ZNF443Q9Y2A4 671 aaPredicted RBP1.61□□□□□ -2.15
SMC4-205ENST00000465563 POFUT2Q9Y2G5 429 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 ZNF780BQ9Y6R6 833 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 SSH2Q76I76 1423 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 PGPA6NDG6 321 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 ZNF729A6NN14 1252 aaPredicted RBP1.6□□□□□ -2.15
SMC4-205ENST00000465563 TCF21O43680 179 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 BRI3O95415 125 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 IGKV1D-33P01593 117 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 IGKV1-33P01594 117 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 IGHV3-53P01767 116 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 HLA-AP01891 365 aaKnown RBP1.6□□□□□ -2.15
SMC4-205ENST00000465563 ELK4P28324 431 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 TSPOP30536 169 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 RANBP1P43487 201 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 PLTPP55058 493 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 KLF3P57682 345 aaPredicted RBP1.6□□□□□ -2.15
SMC4-205ENST00000465563 C1QTNF8P60827 252 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 ZBTB6Q15916 424 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 ACTBL2Q562R1 376 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 USP50Q70EL3 339 aaPredicted RBP1.6□□□□□ -2.15
SMC4-205ENST00000465563 DPPA2Q7Z7J5 298 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 OR4K17Q8NGC6 315 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 MAL2Q969L2 176 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 SUCNR1Q9BXA5 334 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 MFSD1Q9H3U5 465 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 DUSP21Q9H596 190 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 AGPAT3Q9NRZ7 376 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 MRM2Q9UI43 246 aaKnown RBP1.6□□□□□ -2.15
SMC4-205ENST00000465563 ICOSQ9Y6W8 199 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 CACNA1SQ13698 1873 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 KMT2EQ8IZD2 1858 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 ATG2BQ96BY7 2078 aa1.6□□□□□ -2.15
SMC4-205ENST00000465563 ZNF638Q14966 1978 aaKnown RBP1.59□□□□□ -2.15
SMC4-205ENST00000465563 SPATA31E1Q6ZUB1 1445 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 LOC100506127A0A0U1RQW1 187 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 A0A1B0GW15 77 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 F5H5P2 479 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 F8VP50 259 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 ENSAO43768 121 aaKnown RBP1.59□□□□□ -2.15
SMC4-205ENST00000465563 PDCD6O75340 191 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 SOD3P08294 240 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 PRTN3P24158 256 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 HADHBP55084 474 aaKnown RBP1.59□□□□□ -2.15
SMC4-205ENST00000465563 CCL23P55773 120 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 VSNL1P62760 191 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 TNNC1P63316 161 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 CD164Q04900 197 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 PRKCDQ05655 676 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 BNIP2Q12982 314 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 CEACAM21Q3KPI0 293 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 Q3ZCU0 254 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 FBXO48Q5FWF7 155 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 UBE2NLQ5JXB2 153 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 Q6ZQT7 251 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 COPS6Q7L5N1 327 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 LY6G5BQ8NDX9 201 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 OR6K3Q8NGY3 331 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 ACTL9Q8TC94 416 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 TMEM239Q8WW34 195 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 ZMYND19Q96E35 227 aaPredicted RBP1.59□□□□□ -2.15
SMC4-205ENST00000465563 PYURFQ96I23 114 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 OLFM3Q96PB7 478 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 DSN1Q9H410 356 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 DIABLOQ9NR28 239 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 USH1CQ9Y6N9 552 aa1.59□□□□□ -2.15
SMC4-205ENST00000465563 ARAP3Q8WWN8 1544 aa1.59□□□□□ -2.16
SMC4-205ENST00000465563 POLR3AO14802 1390 aaPredicted RBP1.59□□□□□ -2.16
SMC4-205ENST00000465563 OTOFQ9HC10 1997 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 TRAV8-3A0A0A6YYJ7 113 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 A0A1B0GU33 70 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 RAB19A4D1S5 217 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 GGTLC3B5MD39 225 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 TMEM250H0YL14 139 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 IGHMP01871 453 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 IL12BP29460 328 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 MAGEA3P43357 314 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 TSPAN5P62079 268 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 TNFRSF9Q07011 255 aa1.58□□□□□ -2.16
SMC4-205ENST00000465563 DHRS2Q13268 280 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms