RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SLC22A1O15245 554 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 GTF2F2P13984 249 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 DLX6P56179 175 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 MEF2CQ06413 473 aaPredicted RBP16.68■□□□□ 0.26
SKA3-205ENST00000465471 NEDD8Q15843 81 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 TNFRSF14Q92956 283 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 ZNF69Q9UC07 566 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 SHISA3A0PJX4 238 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 UBBP0CG47 229 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 FGF9P31371 208 aaPredicted RBP16.67■□□□□ 0.26
SKA3-205ENST00000465471 P2RX3P56373 397 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 EDDM3BP56851 147 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 BPIFB3P59826 476 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 PAX5Q02548 391 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 MPV17LQ2QL34 196 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 TMEM104Q8NE00 496 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 OR6M1Q8NGM8 313 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 COQ2Q96H96 371 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 PPA2Q9H2U2 334 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 METTL8Q9H825 291 aaKnown RBP16.67■□□□□ 0.26
SKA3-205ENST00000465471 ZNF581Q9P0T4 197 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 STUB1Q9UNE7 303 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 ATRQ13535 2644 aa16.67■□□□□ 0.26
SKA3-205ENST00000465471 IGHV3OR16-10A0A075B7F0 116 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 A0A1W2PPH5 198 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 SLC17A2O00624 439 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 GEMIN2O14893 280 aaKnown RBP16.66■□□□□ 0.26
SKA3-205ENST00000465471 CCL3L1P16619 93 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 PRTN3P24158 256 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 HTR2CP28335 458 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 SCN1BQ07699 218 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 EDDM3AQ14507 147 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 GPR157Q5UAW9 335 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 TPRX1Q8N7U7 411 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 SLC25A28Q96A46 364 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 SLC6A7Q99884 636 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 SIRT7Q9NRC8 400 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 AK6Q9Y3D8 172 aaKnown RBP16.66■□□□□ 0.26
SKA3-205ENST00000465471 LINC00312Q9Y6C7 94 aa16.66■□□□□ 0.26
SKA3-205ENST00000465471 hADV38S2A0JD32 116 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 C17orf98A8MV24 154 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 RBP4P02753 201 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 VSIG8P0DPA2 414 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 MGMTP16455 207 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 CFPP27918 469 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 BLMHQ13867 455 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 PAN3Q58A45 887 aaKnown RBP16.65■□□□□ 0.26
SKA3-205ENST00000465471 USP43Q70EL4 1123 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 BCL6BQ8N143 479 aaPredicted RBP16.65■□□□□ 0.26
SKA3-205ENST00000465471 LHX4Q969G2 390 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 Q96M66 194 aa16.65■□□□□ 0.26
SKA3-205ENST00000465471 TXNL4BQ9NX01 149 aaKnown RBP16.65■□□□□ 0.26
SKA3-205ENST00000465471 RCC2Q9P258 522 aaKnown RBP16.65■□□□□ 0.26
SKA3-205ENST00000465471 IGHV1-69DA0A0B4J2H0 117 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A10PA6NDY2 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A18PA6NE21 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A16PA6NEW6 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A20PA6NIJ5 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A8PA6NJQ4 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A7PA6NKC0 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A22PA8MWA6 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A12PA8MX19 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A5PA8MXJ8 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A23PA8MXZ1 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 RNASEK-C17orf49H0YIS7 233 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 OR7C1O76099 320 aaPredicted RBP16.64■□□□□ 0.25
SKA3-205ENST00000465471 IGHV1-69P01742 117 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A15PP0C7V4 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A13PP0C7W8 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A14PP0C7W9 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 FAM90A24PP0C7X0 464 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 JUNBP17275 347 aaPredicted RBP16.64■□□□□ 0.25
SKA3-205ENST00000465471 FPR2P25090 351 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 KCNJ3P48549 501 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 DLX1P56177 255 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 QRFPP83859 136 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 TAF9Q16594 264 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 C22orf42Q6IC83 251 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 HCP5Q6MZN7 132 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 BRD3OSQ6XYD6 125 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 C22orf15Q8WYQ4 148 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 CST11Q9H112 138 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 NCOR1P1Q9H4R4 102 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 BANF2Q9H503 90 aa16.64■□□□□ 0.25
SKA3-205ENST00000465471 A0A0A6YYJ9 748 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 ODAMA1E959 279 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 FUOMA2VDF0 154 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 TMEM14DPA8MWL7 114 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 CRTAPO75718 401 aaPredicted RBP16.63■□□□□ 0.25
SKA3-205ENST00000465471 BPNT1O95861 308 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 ZNF728P0DKX0 622 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 GLIPR1P48060 266 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 AESQ08117 197 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 UNC119Q13432 240 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 ATXN7L3Q14CW9 347 aaPredicted RBP16.63■□□□□ 0.25
SKA3-205ENST00000465471 NCR3LG1Q68D85 454 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 BPIFB2Q8N4F0 458 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 SUMF2Q8NBJ7 301 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 CORO2AQ92828 525 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 ZNF48Q96MX3 618 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms