RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 MDFIC2A0A1B0GVS7 189 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 MEX3AA1L020 520 aaKnown RBP14.46□□□□□ -0.09
VPS52-214ENST00000463486 DEGS1O15121 323 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 HTR3BO95264 441 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 CSN2P05814 226 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 P2RX3P56373 397 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 FABP5Q01469 135 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 KLRD1Q13241 179 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 CD200R1LQ6Q8B3 271 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 GDPD3Q7L5L3 318 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 JAGN1Q8N5M9 183 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 COQ2Q96H96 371 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 NR1H4Q96RI1 486 aaPredicted RBP14.46□□□□□ -0.09
VPS52-214ENST00000463486 UQCC2Q9BRT2 126 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 METTL9Q9H1A3 318 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 IFT22Q9H7X7 185 aa14.46□□□□□ -0.09
VPS52-214ENST00000463486 MEGF11A6BM72 1044 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 ZNF44P15621 663 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 PSMA1P25786 263 aaKnown RBP14.45□□□□□ -0.1
VPS52-214ENST00000463486 GABRA5P31644 462 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 UBE2E1P51965 193 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 EDDM3BP56851 147 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 RBM11P57052 281 aaKnown RBP14.45□□□□□ -0.1
VPS52-214ENST00000463486 SCN1BQ07699 218 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 EDDM3AQ14507 147 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 TRAM1Q15629 374 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 C1orf100Q5SVJ3 147 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 GLIPR1L1Q6UWM5 242 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 OSR2Q8N2R0 312 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 PNKDQ8N490 385 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 NKAIN3Q8N8D7 197 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 TMEM158Q8WZ71 300 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 PPA2Q9H2U2 334 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 NDUFB11Q9NX14 153 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 ST3GAL6Q9Y274 331 aa14.45□□□□□ -0.1
VPS52-214ENST00000463486 MRPS28Q9Y2Q9 187 aaKnown RBP14.45□□□□□ -0.1
VPS52-214ENST00000463486 A0A0U1RQK1 487 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 GEMIN2O14893 280 aaKnown RBP14.44□□□□□ -0.1
VPS52-214ENST00000463486 ZNF780AO75290 641 aaPredicted RBP14.44□□□□□ -0.1
VPS52-214ENST00000463486 ZNF728P0DKX0 622 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 GLIPR1P48060 266 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 AESQ08117 197 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 SLC22A6Q4U2R8 563 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 HSD17B12Q53GQ0 312 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 ZNF773Q6PK81 442 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 SVOPQ8N4V2 548 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 TMEM104Q8NE00 496 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 ZFAND2BQ8WV99 257 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 CORO2AQ92828 525 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 TCF7L1Q9HCS4 588 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 LINC00312Q9Y6C7 94 aa14.44□□□□□ -0.1
VPS52-214ENST00000463486 hADV38S2A0JD32 116 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 RNF212BA8MTL3 300 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 RBP4P02753 201 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 CGB3P0DN86 165 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 CGB7P0DN87 165 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 SERPINA2P20848 420 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 PAX5Q02548 391 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 BLMHQ13867 455 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 KCTD21Q4G0X4 260 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 NCR3LG1Q68D85 454 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 Q6YL49 198 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 PPP1R35Q8TAP8 253 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 SLC25A28Q96A46 364 aa14.43□□□□□ -0.1
VPS52-214ENST00000463486 KIAA2026Q5HYC2 2103 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 A0A1W2PPH5 198 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 SHISA3A0PJX4 238 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 ODAMA1E959 279 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 DNAJC9-AS1A6NH13 148 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 CLDN34H7C241 214 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 NPFFO15130 113 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 MMP23AO75900 390 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 GTF2F2P13984 249 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 UBA52P62987 128 aaKnown RBP14.42□□□□□ -0.1
VPS52-214ENST00000463486 QRFPP83859 136 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 GUCA2AQ02747 115 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 SLC9A3R2Q15599 337 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.42□□□□□ -0.1
VPS52-214ENST00000463486 PLPPR1Q8TBJ4 325 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 C17orf50Q8WW18 174 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 MRPS24Q96EL2 167 aaKnown RBP14.42□□□□□ -0.1
VPS52-214ENST00000463486 CYYR1Q96J86 154 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 ZNF714Q96N38 554 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 JMJD8Q96S16 334 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 S100A13Q99584 98 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 C19orf24Q9BVV8 132 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 NCOR1P1Q9H4R4 102 aa14.42□□□□□ -0.1
VPS52-214ENST00000463486 A0A1W2PRD5 423 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 A0A1W2PRF3 423 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 A0A1W2PRM7 423 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 SLC22A1O15245 554 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 CSTBP04080 98 aaKnown RBP14.41□□□□□ -0.1
VPS52-214ENST00000463486 MELTFP08582 738 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 IGHV1-8P0DP01 117 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 SAA4P35542 130 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 BAMBIQ13145 260 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 GPR176Q14439 515 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 ATXN7L3Q14CW9 347 aaPredicted RBP14.41□□□□□ -0.1
VPS52-214ENST00000463486 TAF9Q16594 264 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 PAN3Q58A45 887 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms