RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 CHPT1Q8WUD6 406 aa16.4■□□□□ 0.22
CPSF7-209ENST00000463244 NOL4LQ96MY1 436 aaPredicted RBP16.4■□□□□ 0.22
CPSF7-209ENST00000463244 ZFP57Q9NU63 452 aa16.4■□□□□ 0.22
CPSF7-209ENST00000463244 GSTK1Q9Y2Q3 226 aa16.4■□□□□ 0.22
CPSF7-209ENST00000463244 A0A1W2PQL4 384 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-209ENST00000463244 ODAMA1E959 279 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 METTL15A6NJ78 407 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 NUDT19A8MXV4 375 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 SULT1C4O75897 302 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 EPHA2P29317 976 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 PDZK1IP1Q13113 114 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 RBM39Q14498 530 aaKnown RBP16.39■□□□□ 0.21
CPSF7-209ENST00000463244 KLHL30-AS1Q8NEE0 82 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 ADAT3Q96EY9 351 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-209ENST00000463244 THTPAQ9BU02 230 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 COMMD4Q9H0A8 199 aa16.39■□□□□ 0.21
CPSF7-209ENST00000463244 RYR2Q92736 4967 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 CSN2P05814 226 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 UBCP0CG48 685 aaKnown RBP16.38■□□□□ 0.21
CPSF7-209ENST00000463244 GYS2P54840 703 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 C17orf58Q2M2W7 97 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 C12orf73Q69YU5 71 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 LHFPL2Q6ZUX7 228 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 UTS2BQ765I0 119 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 RDH10Q8IZV5 341 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 C5orf56Q8N8D9 126 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 TFAP2CQ92754 450 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 COQ2Q96H96 371 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 IL4I1Q96RQ9 567 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 PCDHB16Q9NRJ7 776 aa16.38■□□□□ 0.21
CPSF7-209ENST00000463244 IGKV1-12A0A0C4DH73 117 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 ZAR1LA6NP61 321 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 RAMP3O60896 148 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 IGKV1D-12P01611 117 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 SNRNP70P08621 437 aaKnown RBP16.37■□□□□ 0.21
CPSF7-209ENST00000463244 OR2T7P0C7T2 308 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 PRKACBP22694 351 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 KIR3DL2P43630 455 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 KRBOX4Q5JUW0 171 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 SPATA24Q86W54 205 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 OR56B4Q8NH76 319 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 OR9G1Q8NH87 305 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 TOMM40LQ969M1 308 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 RPEQ96AT9 228 aa16.37■□□□□ 0.21
CPSF7-209ENST00000463244 WARS2Q9UGM6 360 aaKnown RBP16.37■□□□□ 0.21
CPSF7-209ENST00000463244 LSM4Q9Y4Z0 139 aaKnown RBP16.37■□□□□ 0.21
CPSF7-209ENST00000463244 TCRBV3S1A0A5B6 114 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 ZNF729A6NN14 1252 aaPredicted RBP16.36■□□□□ 0.21
CPSF7-209ENST00000463244 SERPINE3A8MV23 424 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 FGF16O43320 207 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 MITFO75030 526 aaPredicted RBP16.36■□□□□ 0.21
CPSF7-209ENST00000463244 KDM4BO94953 1096 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 FAM107AO95990 144 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 ZNF44P15621 663 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 ATF1P18846 271 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 ZNF695Q8IW36 515 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 COMMD1Q8N668 190 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 RFT1Q96AA3 541 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 SPSB1Q96BD6 273 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 KIRREL1Q96J84 757 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 OPALINQ96PE5 141 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 LINC00527Q9UJ94 153 aa16.36■□□□□ 0.21
CPSF7-209ENST00000463244 ATP8B1O43520 1251 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 APOL3O95236 402 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 NFYBP25208 207 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
CPSF7-209ENST00000463244 ISL1P61371 349 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 SLC35B1P78383 322 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 FLOT2Q14254 428 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 NKAPLQ5M9Q1 402 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 Q6P435 159 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 DRAM1Q8N682 238 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 CHST4Q8NCG5 386 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 OR10H4Q8NGA5 316 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 RNF166Q96A37 237 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-209ENST00000463244 RAX2Q96IS3 184 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 DUX3Q96PT4 197 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 PPIL3Q9H2H8 161 aaKnown RBP16.35■□□□□ 0.21
CPSF7-209ENST00000463244 KRT84Q9NSB2 600 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 ING3Q9NXR8 418 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 OR6C3Q9NZP0 311 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 AMMECR1Q9Y4X0 333 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-209ENST00000463244 TENM2Q9NT68 2774 aa16.35■□□□□ 0.21
CPSF7-209ENST00000463244 KBTBD11-OT1A0A1B0GTJ5 212 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 A0A1W2PPI3 338 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 C3orf84H3BNL1 204 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 SLC33A1O00400 549 aaPredicted RBP16.34■□□□□ 0.21
CPSF7-209ENST00000463244 IGHG2P01859 326 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 CGB3P0DN86 165 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 CGB7P0DN87 165 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 TMEM11P17152 192 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 HTR1FP30939 366 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 SCN1BQ07699 218 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 HES1Q14469 280 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 ATXN7L3Q14CW9 347 aaPredicted RBP16.34■□□□□ 0.21
CPSF7-209ENST00000463244 TMEM244Q5VVB8 128 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 UTP4Q969X6 686 aaKnown RBP16.34■□□□□ 0.21
CPSF7-209ENST00000463244 FGGYQ96C11 551 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 RHOFQ9HBH0 211 aa16.34■□□□□ 0.21
CPSF7-209ENST00000463244 J3QR06 171 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms