RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SLC5A7Q9GZV3 580 aa3.71□□□□□ -1.82
COPS3-204ENST00000462236 TXNIPQ9H3M7 391 aa3.71□□□□□ -1.82
COPS3-204ENST00000462236 TMEM27Q9HBJ8 222 aa3.71□□□□□ -1.82
COPS3-204ENST00000462236 RAB9BQ9NP90 201 aa3.71□□□□□ -1.82
COPS3-204ENST00000462236 POLE4Q9NR33 117 aa3.71□□□□□ -1.82
COPS3-204ENST00000462236 SIRT7Q9NRC8 400 aa3.71□□□□□ -1.82
COPS3-204ENST00000462236 AIG1Q9NVV5 245 aa3.71□□□□□ -1.82
COPS3-204ENST00000462236 STX18Q9P2W9 335 aaKnown RBP3.71□□□□□ -1.82
COPS3-204ENST00000462236 DUX4Q9UBX2 424 aa3.71□□□□□ -1.82
COPS3-204ENST00000462236 TRAV38-1A0A0B4J264 116 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 A0A0J9YWU9 116 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 IGHV3-64DA0A0J9YX35 117 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 A0A1W2PRG6 482 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 GMNCA6NCL1 334 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 M0R1W7 72 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 FBP2O00757 339 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 SOCS3O14543 225 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 RFXANKO14593 260 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 SGCEO43556 437 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 SYT7O43581 403 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 IDH3BO43837 385 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 OR6A2O95222 327 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 GYPAP02724 150 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 SHBGP04278 402 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 HLA-DPB1P04440 258 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 ATP6V1B1P15313 513 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 MSR1P21757 451 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 ACKR3P25106 362 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 HTR5AP47898 357 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 TGM4P49221 684 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 DAP3P51398 398 aaKnown RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 RGS8P57771 180 aaPredicted RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 HIST1H3AP68431 136 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 ELF3P78545 371 aaPredicted RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 PRB3Q04118 309 aaPredicted RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 LY6EQ16553 131 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 C14orf177Q52M58 125 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 CCDC92Q53HC0 331 aaPredicted RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 DMRTC1Q5HYR2 192 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 HIST2H3PS2Q5TEC6 136 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 PRAMEF6Q5VXH4 476 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 SIGLEC15Q6ZMC9 328 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 ZNF497Q6ZNH5 498 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 HIST2H3AQ71DI3 136 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 RANBP3LQ86VV4 465 aaPredicted RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 SLC30A8Q8IWU4 369 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 LAX1Q8IWV1 398 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 MSRB3Q8IXL7 192 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 C11orf53Q8IXP5 236 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 C4orf33Q8N1A6 199 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 C11orf42Q8N5U0 333 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 SDR9C7Q8NEX9 313 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 GPR32P1Q8NGA4 272 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 OR4D11Q8NGI4 311 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 FNDC8Q8TC99 324 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 RORBQ92753 470 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 GTF2H4Q92759 462 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 C11orf52Q96A22 123 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 RFT1Q96AA3 541 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 BPIFA2Q96DR5 249 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 SORT1Q99523 831 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 GPR61Q9BZJ8 451 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 GFRA4Q9GZZ7 299 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 MEAF6Q9HAF1 191 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 GPN1Q9HCN4 374 aaPredicted RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 INIPQ9NRY2 104 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 TMEM100Q9NV29 134 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 PRPF19Q9UMS4 504 aaKnown RBP3.7□□□□□ -1.82
COPS3-204ENST00000462236 DNAH17Q9UFH2 4485 aa3.7□□□□□ -1.82
COPS3-204ENST00000462236 FAT2Q9NYQ8 4349 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 A0A1W2PRD5 423 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 A0A1W2PRF3 423 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 A0A1W2PRM7 423 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 A6NDX4 124 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 C12orf71A8MTZ7 269 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 SDHDO14521 159 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 POLR3GO15318 223 aaPredicted RBP3.69□□□□□ -1.82
COPS3-204ENST00000462236 SYNGR1O43759 233 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 OR7A10O76100 309 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 PAHP00439 452 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 MT-ND1P03886 318 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 IL6P05231 212 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 BPGMP07738 259 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 NR2C1P13056 603 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 PAX6P26367 422 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 FCGR2BP31994 310 aaPredicted RBP3.69□□□□□ -1.82
COPS3-204ENST00000462236 FCGR2CP31995 323 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 AQP2P41181 271 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 RPL27P61353 136 aaKnown RBP3.69□□□□□ -1.82
COPS3-204ENST00000462236 MFGE8Q08431 387 aaPredicted RBP3.69□□□□□ -1.82
COPS3-204ENST00000462236 CD47Q08722 323 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 SCRN3Q0VDG4 424 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 KIAA0141Q14154 515 aaPredicted RBP3.69□□□□□ -1.82
COPS3-204ENST00000462236 DUSP7Q16829 419 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 NCR3LG1Q68D85 454 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 REEP3Q6NUK4 255 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 NANOGNBQ7Z5D8 188 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 KRTAP7-1Q8IUC3 87 aa3.69□□□□□ -1.82
COPS3-204ENST00000462236 NUDCD3Q8IVD9 361 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms