RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 LY6G5BQ8NDX9 201 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 C8orf46Q8TAG6 207 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 NDNFQ8TB73 568 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 RAB40AQ8WXH6 277 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 SLC25A46Q96AG3 418 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 NICN1Q9BSH3 213 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 DCTN5Q9BTE1 182 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 TMEM59Q9BXS4 323 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 RBM38Q9H0Z9 239 aaKnown RBP9.32□□□□□ -0.92
SSBP1-202ENST00000461433 RCC2Q9P258 522 aaKnown RBP9.32□□□□□ -0.92
SSBP1-202ENST00000461433 RPUSD1Q9UJJ7 312 aaKnown RBP9.32□□□□□ -0.92
SSBP1-202ENST00000461433 INSIG2Q9Y5U4 225 aa9.32□□□□□ -0.92
SSBP1-202ENST00000461433 IGHV2-70DA0A0C4DH43 119 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 KIR2DS1A0A191URI9 304 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A10PA6NDY2 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A18PA6NE21 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A16PA6NEW6 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A20PA6NIJ5 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A8PA6NJQ4 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A7PA6NKC0 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FOXI3A8MTJ6 420 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A22PA8MWA6 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A12PA8MX19 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A5PA8MXJ8 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A23PA8MXZ1 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 OR7C1O76099 320 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-202ENST00000461433 ECDO95905 644 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-202ENST00000461433 PAHP00439 452 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 CSN2P05814 226 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A15PP0C7V4 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A13PP0C7W8 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A14PP0C7W9 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 FAM90A24PP0C7X0 464 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 SNRPBP14678 240 aaKnown RBP9.31□□□□□ -0.92
SSBP1-202ENST00000461433 SPCS2Q15005 226 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 GRK1Q15835 563 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 IDNKQ5T6J7 187 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 CD276Q5ZPR3 534 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 BRICD5Q6PL45 260 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 CLEC9AQ6UXN8 241 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 GLCCI1Q86VQ1 547 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 SUMF2Q8NBJ7 301 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 OR5D13Q8NGL4 314 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 RAB2BQ8WUD1 216 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 ISOC1Q96CN7 298 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 BCL7BQ9BQE9 202 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 DCSTAMPQ9H295 470 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 PPA2Q9H2U2 334 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 C19orf12Q9NSK7 152 aa9.31□□□□□ -0.92
SSBP1-202ENST00000461433 HSPB6O14558 160 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 MGST3O14880 152 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 AVPP01185 164 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 PAX8Q06710 450 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 USP43Q70EL4 1123 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 TCF23Q7RTU1 214 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 RTN4RL2Q86UN3 420 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 BPIFB2Q8N4F0 458 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 OR4M1Q8NGD0 313 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 OR5H6Q8NGV6 325 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 H1FXQ92522 213 aaKnown RBP9.3□□□□□ -0.92
SSBP1-202ENST00000461433 PTX4Q96A99 478 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 COQ2Q96H96 371 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 NUDT16L1Q9BRJ7 211 aaKnown RBP9.3□□□□□ -0.92
SSBP1-202ENST00000461433 DPCDQ9BVM2 203 aaPredicted RBP9.3□□□□□ -0.92
SSBP1-202ENST00000461433 TMPRSS13Q9BYE2 586 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 RAB22AQ9UL26 194 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 WNK2Q9Y3S1 2297 aa9.3□□□□□ -0.92
SSBP1-202ENST00000461433 H3BMQ9 156 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 SOCS1O15524 211 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 ENSAO43768 121 aaKnown RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 TMEM127O75204 238 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 RAB6AP20340 208 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 FUT3P21217 361 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 ERP29P30040 261 aaKnown RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 RANBP1P43487 201 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 TMEM50BP56557 158 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 PAX5Q02548 391 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 AESQ08117 197 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 PAN3Q58A45 887 aaKnown RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 ATAD3CQ5T2N8 411 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 DCAF12L2Q5VW00 463 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 TMEM200BQ69YZ2 307 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 C1orf229Q6ZS94 237 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 Q71RC1 249 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 GDPD3Q7L5L3 318 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 CROCCP3Q8IVE0 287 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 TPRX1Q8N7U7 411 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 LGALS14Q8TCE9 139 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 YAE1D1Q9NRH1 226 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 SVEP1Q4LDE5 3571 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 TRBV23-1A0A0A0MS06 115 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 PPIAL4GP0DN37 164 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 GATA3P23771 443 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 CHATP28329 748 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 GLIPR1P48060 266 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 SCAND1P57086 179 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 RPL31P62899 125 aaKnown RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 EDDM3AQ14507 147 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms