RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 RSRP1Q9BUV0 290 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 C1QTNF6Q9BXI9 259 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 RIMS4Q9H426 269 aaPredicted RBP17.23■□□□□ 0.35
CCM2-203ENST00000461377 PPYP01298 95 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 RLN2P04090 185 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 RBMXL3Q8N7X1 1067 aaKnown RBP17.22■□□□□ 0.35
CCM2-203ENST00000461377 OPN3Q9H1Y3 402 aaPredicted RBP17.22■□□□□ 0.35
CCM2-203ENST00000461377 ZNF71Q9NQZ8 489 aaPredicted RBP17.22■□□□□ 0.35
CCM2-203ENST00000461377 SLC2A9Q9NRM0 540 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 KCNIP3Q9Y2W7 256 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 TRAV24A0A0B4J272 114 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 HSPB6O14558 160 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 TMEM187Q14656 261 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 ASCL5Q7RTU5 278 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 SCCPDHQ8NBX0 429 aa17.22■□□□□ 0.35
CCM2-203ENST00000461377 TRBV6-6A0A0A6YYG2 114 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 MPV17P39210 176 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 ERVK11-1P61568 191 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 P2RY6Q15077 328 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 PHLDA2Q53GA4 152 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 SNIP1Q8TAD8 396 aaKnown RBP17.21■□□□□ 0.35
CCM2-203ENST00000461377 MRPL30Q8TCC3 161 aaKnown RBP17.21■□□□□ 0.35
CCM2-203ENST00000461377 KLF14Q8TD94 323 aaPredicted RBP17.21■□□□□ 0.35
CCM2-203ENST00000461377 SUCNR1Q9BXA5 334 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 OBP2BQ9NPH6 170 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 MED9Q9NWA0 146 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 MEMO1Q9Y316 297 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 CACNA1GO43497 2377 aa17.21■□□□□ 0.35
CCM2-203ENST00000461377 KIR2DS1A0A191URI9 304 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 TRDCB7Z8K6 153 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 K7EM74 188 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 IGLV1-44P01699 117 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 SCTP09683 121 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 OR5AC1P0C628 307 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 KIR2DS4P43632 304 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 LUMP51884 338 aaPredicted RBP17.2■□□□□ 0.34
CCM2-203ENST00000461377 RAB32Q13637 225 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 KIR2DS1Q14954 304 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 RGS7BPQ6MZT1 257 aaPredicted RBP17.2■□□□□ 0.34
CCM2-203ENST00000461377 Q6P435 159 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 Q8IYB0 196 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 MARVELD3Q96A59 401 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 RRNAD1Q96FB5 475 aaKnown RBP17.2■□□□□ 0.34
CCM2-203ENST00000461377 ARPC5LQ9BPX5 153 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 RASL12Q9NYN1 266 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 OR5AC2Q9NZP5 309 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 POLDIP2Q9Y2S7 368 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 ATP23Q9Y6H3 246 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 C3orf80F5H4A9 247 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 KCNAB3O43448 404 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 CECR9P0C854 216 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 HERPUD1Q15011 391 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 GGNBP1Q5YKI7 109 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 C5orf24Q7Z6I8 188 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 LRTM2Q8N967 370 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 CCDC71LQ8N9Z2 235 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 OR5T2Q8NGG2 359 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 MRPL24Q96A35 216 aaKnown RBP17.2■□□□□ 0.34
CCM2-203ENST00000461377 SYT3Q9BQG1 590 aa17.2■□□□□ 0.34
CCM2-203ENST00000461377 ZNF471Q9BX82 626 aaPredicted RBP17.2■□□□□ 0.34
CCM2-203ENST00000461377 URB1O60287 2271 aaKnown RBP17.2■□□□□ 0.34
CCM2-203ENST00000461377 ZFHX2Q9C0A1 2572 aaPredicted RBP17.19■□□□□ 0.34
CCM2-203ENST00000461377 HS3ST1O14792 307 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 SLC34A2O95436 690 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 IFNA21P01568 189 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 PET100P0DJ07 73 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 TUBG1P23258 451 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 ZNF154Q13106 437 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 AANATQ16613 207 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 IAH1Q2TAA2 248 aaPredicted RBP17.19■□□□□ 0.34
CCM2-203ENST00000461377 TOR2AQ5JU69 321 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 ZNF880Q6PDB4 577 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 BHLHA15Q7RTS1 189 aaPredicted RBP17.19■□□□□ 0.34
CCM2-203ENST00000461377 OR11L1Q8NGX0 322 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 RDH5Q92781 318 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 CXorf58Q96LI9 332 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 TUBG2Q9NRH3 451 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 GSKIPQ9P0R6 139 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 TMEM210A6NLX4 147 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 PROB1E7EW31 1015 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 DIRAS3O95661 229 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 TK1P04183 234 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 CTXN2P0C2S0 81 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 PGA5P0DJD9 388 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 P2RX3P56373 397 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 OR8G1Q15617 311 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 SP6Q3SY56 376 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 UNQ6126/PRO20091Q6UXV3 157 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 BEND4Q6ZU67 534 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 PHYHIPLQ96FC7 376 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 DMRTA2Q96SC8 542 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 NRIP2Q9BQI9 281 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 TUBD1Q9UJT1 453 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 FAM215AQ9Y5M1 114 aa17.19■□□□□ 0.34
CCM2-203ENST00000461377 IGKV1-6A0A0C4DH72 117 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 hCG_1807616A0A1W2PRN6 198 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 POM121CA8CG34 1229 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 H0YL77 283 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 DEGS1O15121 323 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 TUSC2O75896 110 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms