RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 RAB11BQ15907 218 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 TAF9Q16594 264 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 FAM185AQ8N0U4 392 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 CHST4Q8NCG5 386 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 Q96M66 194 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 KCTD7Q96MP8 289 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 MRI1Q9BV20 369 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 FUNDC2Q9BWH2 189 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 BEX2Q9BXY8 128 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 SELENOIQ9C0D9 397 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 SIRPDQ9H106 197 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 PCDHB16Q9NRJ7 776 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 GHRLQ9UBU3 117 aa11.53□□□□□ -0.56
HDLBP-229ENST00000460826 TRBV23-1A0A0A0MS06 115 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 A0A0B4J203 849 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 A0A1W2PQ09 198 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 HSPB6O14558 160 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 MGST3O14880 152 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 AIREO43918 545 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 OR7C1O76099 320 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-229ENST00000460826 BPNT1O95861 308 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 FSHBP01225 129 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 LIPFP07098 398 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 SLC2A2P11168 524 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-229ENST00000460826 DLX1P56177 255 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 EDDM3BP56851 147 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.57
HDLBP-229ENST00000460826 PLA2G7Q13093 441 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 ATXN7L3Q14CW9 347 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-229ENST00000460826 CHRFAM7AQ494W8 412 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 PAN3Q58A45 887 aaKnown RBP11.52□□□□□ -0.57
HDLBP-229ENST00000460826 KLF17Q5JT82 389 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-229ENST00000460826 TMEM200BQ69YZ2 307 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 BRICD5Q6PL45 260 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 GDPD3Q7L5L3 318 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 TCF23Q7RTU1 214 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 BPIFB2Q8N4F0 458 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 Q8N7P7 452 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 OR51D1Q8NGF3 324 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 OR5D13Q8NGL4 314 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 PLPPR1Q8TBJ4 325 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 COQ2Q96H96 371 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 TBX15Q96SF7 602 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 PCGF1Q9BSM1 259 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 NAA50Q9GZZ1 169 aaKnown RBP11.52□□□□□ -0.57
HDLBP-229ENST00000460826 ING3Q9NXR8 418 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 ONECUT1Q9UBC0 465 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 CUBNO60494 3623 aa11.52□□□□□ -0.57
HDLBP-229ENST00000460826 IFITM5A6NNB3 132 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 CCL3L1P16619 93 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 HNF1AP20823 631 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 PSMD7P51665 324 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 RPS27AP62979 156 aaKnown RBP11.51□□□□□ -0.57
HDLBP-229ENST00000460826 PRB3Q04118 309 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-229ENST00000460826 MXD1Q05195 221 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 AESQ08117 197 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 MPV17LQ2QL34 196 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 TIMM50Q3ZCQ8 353 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 ATAD3CQ5T2N8 411 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 SIGIRRQ6IA17 410 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 GDPGP1Q6ZNW5 385 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 LINC00596Q86U02 117 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 SUMF2Q8NBJ7 301 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 PPP1R35Q8TAP8 253 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 FAM3DQ96BQ1 224 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 UPRTQ96BW1 309 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 MRPS24Q96EL2 167 aaKnown RBP11.51□□□□□ -0.57
HDLBP-229ENST00000460826 WDFY2Q96P53 400 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 NICN1Q9BSH3 213 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 CST11Q9H112 138 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 IFT22Q9H7X7 185 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 LPAR3Q9UBY5 353 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 STEAP1Q9UHE8 339 aa11.51□□□□□ -0.57
HDLBP-229ENST00000460826 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 A0A0A6YYD4 124 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 NOTOA8MTQ0 251 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 LDLRAD4O15165 306 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 TOX4O94842 621 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 CSN2P05814 226 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 ARSBP15848 533 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 HOXB4P17483 251 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-229ENST00000460826 CFPP27918 469 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 SRP14P37108 136 aaKnown RBP11.5□□□□□ -0.57
HDLBP-229ENST00000460826 GLIPR1P48060 266 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 DLX6P56179 175 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 P2RX3P56373 397 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 ERVFRD-1P60508 538 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 C2orf76Q3KRA6 126 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 METTL11BQ5VVY1 283 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 SLC16A12Q6ZSM3 486 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 OR2W3Q7Z3T1 314 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 RTN4RL2Q86UN3 420 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 TPRA1Q86W33 373 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 KIR3DL3Q8N743 410 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 KCNG3Q8TAE7 436 aa11.5□□□□□ -0.57
HDLBP-229ENST00000460826 DMRTB1Q96MA1 342 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms