RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 RERGQ96A58 199 aaPredicted RBP1.78□□□□□ -2.12
RFC4-211ENST00000460408 RCN3Q96D15 328 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 MSANTD3Q96H12 275 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 IP6K3Q96PC2 410 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 CTRCQ99895 268 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 EMC6Q9BV81 110 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 NUDT9Q9BW91 350 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 RGCCQ9H4X1 137 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 RPRD1BQ9NQG5 326 aaKnown RBP1.78□□□□□ -2.12
RFC4-211ENST00000460408 FBXO8Q9NRD0 319 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 DDX19BQ9UMR2 479 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 SIGLEC7Q9Y286 467 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 LRRC42Q9Y546 428 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 SPENQ96T58 3664 aaKnown RBP1.78□□□□□ -2.12
RFC4-211ENST00000460408 PKD1L1Q8TDX9 2849 aa1.78□□□□□ -2.12
RFC4-211ENST00000460408 RTTNQ86VV8 2226 aa1.78□□□□□ -2.13
RFC4-211ENST00000460408 ANKRD12Q6UB98 2062 aa1.78□□□□□ -2.13
RFC4-211ENST00000460408 MYH3P11055 1940 aa1.78□□□□□ -2.13
RFC4-211ENST00000460408 ATMQ13315 3056 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 CELSR1Q9NYQ6 3014 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 LHBP01229 141 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 IGLV3-19P01714 112 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 GZMAP12544 262 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 PSMB5P28074 263 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 PCK1P35558 622 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 CMC4P56277 68 aaPredicted RBP1.77□□□□□ -2.13
RFC4-211ENST00000460408 ELF3P78545 371 aaPredicted RBP1.77□□□□□ -2.13
RFC4-211ENST00000460408 RPL18AQ02543 176 aaKnown RBP1.77□□□□□ -2.13
RFC4-211ENST00000460408 IGFBP7Q16270 282 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 HADHQ16836 314 aaKnown RBP1.77□□□□□ -2.13
RFC4-211ENST00000460408 KPRPQ5T749 579 aaPredicted RBP1.77□□□□□ -2.13
RFC4-211ENST00000460408 PRR9Q5T870 116 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 SPNS3Q6ZMD2 512 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 NDUFAF7Q7L592 441 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 LRRC52Q8N7C0 313 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 ZNF721Q8TF20 911 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 DCAKDQ8WVC6 231 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 RXFP2Q8WXD0 754 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 BAALCQ8WXS3 180 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 S100PBPQ96BU1 408 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 SMARCD1Q96GM5 515 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 RDH12Q96NR8 316 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 ANP32EQ9BTT0 268 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 SFXN3Q9BWM7 321 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 OR51B5Q9H339 312 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 ZMAT5Q9UDW3 170 aaKnown RBP1.77□□□□□ -2.13
RFC4-211ENST00000460408 CES1P1Q9UKY3 287 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 FARSAQ9Y285 508 aaKnown RBP1.77□□□□□ -2.13
RFC4-211ENST00000460408 SCN1AP35498 2009 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 MYH13Q9UKX3 1938 aa1.77□□□□□ -2.13
RFC4-211ENST00000460408 MUC22E2RYF6 1773 aaPredicted RBP1.77□□□□□ -2.13
RFC4-211ENST00000460408 F5P12259 2224 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 KNTC1P50748 2209 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 NBEAL2Q6ZNJ1 2754 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 SCN10AQ9Y5Y9 1956 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 LAMA1P25391 3075 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 MGAQ8IWI9 3026 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 HACD1B0YJ81 288 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 M0R1X1 148 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 GATBO75879 557 aaKnown RBP1.76□□□□□ -2.13
RFC4-211ENST00000460408 NTF3P20783 257 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 MSR1P21757 451 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 APLNRP35414 380 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 YWHAEP62258 255 aaKnown RBP1.76□□□□□ -2.13
RFC4-211ENST00000460408 NAB1Q13506 487 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 ASCL4Q6XD76 172 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 SLC35D2Q76EJ3 337 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 OR2W3Q7Z3T1 314 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 LINC00523Q86TU6 105 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 SLC30A8Q8IWU4 369 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 WDR31Q8NA23 367 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 KLF14Q8TD94 323 aaPredicted RBP1.76□□□□□ -2.13
RFC4-211ENST00000460408 OR8D1Q8WZ84 308 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 CFAP53Q96M91 514 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 ZFP3Q96NJ6 502 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 BCL7BQ9BQE9 202 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 FBXO44Q9H4M3 255 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 LINC00574Q9H8X3 128 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 CHRAC1Q9NRG0 131 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 HEBP1Q9NRV9 189 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 VAX2Q9UIW0 290 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 MED13Q9UHV7 2174 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 MYH7BA7E2Y1 1941 aa1.76□□□□□ -2.13
RFC4-211ENST00000460408 KIAA1671Q9BY89 1806 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 M0QZ92 97 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 ZNF701M0R085 212 aaPredicted RBP1.75□□□□□ -2.13
RFC4-211ENST00000460408 MANBAO00462 879 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 LCA5LO95447 670 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 PTHP01270 115 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 HSPD1P10809 573 aaKnown RBP1.75□□□□□ -2.13
RFC4-211ENST00000460408 CD99P14209 185 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 PRKACAP17612 351 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 NELFEP18615 380 aaKnown RBP1.75□□□□□ -2.13
RFC4-211ENST00000460408 PRKACBP22694 351 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 CPN2P22792 545 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 CSKP41240 450 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 BCAP31P51572 246 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 PSMD4P55036 377 aaKnown RBP1.75□□□□□ -2.13
RFC4-211ENST00000460408 PAFAH1B2P68402 229 aa1.75□□□□□ -2.13
RFC4-211ENST00000460408 INCA1Q0VD86 236 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms