RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 NFYBP25208 207 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 UCP1P25874 307 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 RPL35P42766 123 aaKnown RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 CAMLGP49069 296 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 AKR1D1P51857 326 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 RBM11P57052 281 aaKnown RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 MLF1P58340 268 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 HERV-K104P61576 105 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 CHAF1BQ13112 559 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 CLINT1Q14677 625 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 RTP5Q14D33 572 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 MPV17LQ2QL34 196 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 EIF2S3LQ2VIR3 472 aaKnown RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 SNAI3Q3KNW1 292 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ACSF3Q4G176 576 aaPredicted RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 MIDNQ504T8 468 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ABLIM2Q6H8Q1 611 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 GUSBP11Q6P575 273 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 COLCA1Q6ZS62 124 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 OR10AD1Q8NGE0 317 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 OR5D18Q8NGL1 313 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 OR10G4Q8NGN3 311 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 OR8U1Q8NH10 309 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 LILRB1Q8NHL6 650 aaPredicted RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 SECTM1Q8WVN6 248 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ERGIC1Q969X5 290 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 TMEM45BQ96B21 275 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 BOD1Q96IK1 185 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 AKR1E2Q96JD6 320 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 CCDC74BQ96LY2 380 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ZNF385AQ96PM9 386 aaKnown RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 USB1Q9BQ65 265 aaKnown RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ZNF251Q9BRH9 671 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 C1QTNF5Q9BXJ0 243 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 LINC00470Q9BZP3 86 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 TMEM222Q9H0R3 208 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 LIME1Q9H400 295 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 RIMS4Q9H426 269 aaPredicted RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 PLEKHF2Q9H8W4 249 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 KCNJ16Q9NPI9 418 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 RPS10P5Q9NQ39 176 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 FSCN3Q9NQT6 498 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 SIRT7Q9NRC8 400 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 GPR173Q9NS66 373 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 PRR13Q9NZ81 148 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 KIAA1456Q9P272 454 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 DKKL1Q9UK85 242 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 U3KQA8 63 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 SPTBN2O15020 2390 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 IGKV1-27A0A075B6S5 117 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 CCDC187A0A096LP49 1063 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 TRAV1-1A0A0B4J248 108 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 KIR2DS1A0A191URI9 304 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 C3orf85A0A1B0GTC6 90 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 FAM230AA0A1W2PPH8 454 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 C5orf63A6NC05 138 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 ZNF716A6NP11 495 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 B4DEV8 164 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 C9J4A7 227 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 C9JQL5 133 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 MPPED1O15442 326 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 TGOLN2O43493 480 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 EIF3GO75821 320 aaKnown RBP eCLIP5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 TUSC2O75896 110 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 DIRAS3O95661 229 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 NAPSAO96009 420 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 F12P00748 615 aaPredicted RBP5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 PPYP01298 95 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 IFNA17P01571 189 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 HBE1P02100 147 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 LCATP04180 440 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 HSPB1P04792 205 aaKnown RBP5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 ACAA1P09110 424 aaPredicted RBP5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 COX6A1P12074 109 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 ZNF44P15621 663 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 BTF3P20290 206 aaKnown RBP5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 RAB5AP20339 215 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 VDAC1P21796 283 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 KIR2DS4P43632 304 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 PPT1P50897 306 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 CARD18P57730 90 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 B3GALT5-AS1P59052 145 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 RAB2AP61019 212 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 ID3Q02535 119 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 PMS2P11Q13670 270 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 KIR2DS1Q14954 304 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 RNPS1Q15287 305 aaKnown RBP5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 TAF9Q16594 264 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 HIKESHIQ53FT3 197 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 AWAT1Q58HT5 328 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 HES3Q5TGS1 186 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 RAET1LQ5VY80 246 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 ALKBH2Q6NS38 261 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 SLC22A25Q6T423 547 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 FIP1L1Q6UN15 594 aaKnown RBP5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 LYZL2Q7Z4W2 148 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 DPPA2Q7Z7J5 298 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 RPS19BP1Q86WX3 136 aaKnown RBP5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 FOXRED2Q8IWF2 684 aa5.29□□□□□ -1.56
UBQLN4-202ENST00000459954 FBXL14Q8N1E6 418 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms