RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 TMEM30CPA0ZSE6 113 aa8.82□□□□□ -1
UBR4-208ENST00000459947 MCRIP1C9JLW8 97 aa8.82□□□□□ -1
UBR4-208ENST00000459947 ZNF728P0DKX0 622 aa8.82□□□□□ -1
UBR4-208ENST00000459947 FABP5Q01469 135 aa8.82□□□□□ -1
UBR4-208ENST00000459947 SLC22A6Q4U2R8 563 aa8.82□□□□□ -1
UBR4-208ENST00000459947 SLC35E4Q6ICL7 350 aa8.82□□□□□ -1
UBR4-208ENST00000459947 LYPD6Q86Y78 171 aa8.82□□□□□ -1
UBR4-208ENST00000459947 DTX3Q8N9I9 347 aa8.82□□□□□ -1
UBR4-208ENST00000459947 SEH1LQ96EE3 360 aa8.82□□□□□ -1
UBR4-208ENST00000459947 RIMS4Q9H426 269 aaPredicted RBP8.82□□□□□ -1
UBR4-208ENST00000459947 C17orf98A8MV24 154 aa8.82□□□□□ -1
UBR4-208ENST00000459947 TRIM77I1YAP6 450 aa8.82□□□□□ -1
UBR4-208ENST00000459947 MMP9P14780 707 aa8.82□□□□□ -1
UBR4-208ENST00000459947 OR3A1P47881 315 aa8.82□□□□□ -1
UBR4-208ENST00000459947 EDDM3BP56851 147 aa8.82□□□□□ -1
UBR4-208ENST00000459947 MIDNQ504T8 468 aa8.82□□□□□ -1
UBR4-208ENST00000459947 CRIP3Q6Q6R5 217 aa8.82□□□□□ -1
UBR4-208ENST00000459947 TMEM203Q969S6 136 aa8.82□□□□□ -1
UBR4-208ENST00000459947 CREB3L1Q96BA8 519 aa8.82□□□□□ -1
UBR4-208ENST00000459947 TMEM59Q9BXS4 323 aa8.82□□□□□ -1
UBR4-208ENST00000459947 MRPS26Q9BYN8 205 aaKnown RBP8.82□□□□□ -1
UBR4-208ENST00000459947 IGHV1-69DA0A0B4J2H0 117 aa8.82□□□□□ -1
UBR4-208ENST00000459947 IGHV1-69P01742 117 aa8.82□□□□□ -1
UBR4-208ENST00000459947 MGMTP16455 207 aa8.82□□□□□ -1
UBR4-208ENST00000459947 RAB3BP20337 219 aa8.82□□□□□ -1
UBR4-208ENST00000459947 C6orf183Q5T699 404 aa8.82□□□□□ -1
UBR4-208ENST00000459947 PTX4Q96A99 478 aa8.82□□□□□ -1
UBR4-208ENST00000459947 NEDD4LQ96PU5 975 aa8.82□□□□□ -1
UBR4-208ENST00000459947 PCGF1Q9BSM1 259 aa8.82□□□□□ -1
UBR4-208ENST00000459947 CENPOQ9BU64 300 aa8.82□□□□□ -1
UBR4-208ENST00000459947 DOCK11Q5JSL3 2073 aa8.81□□□□□ -1
UBR4-208ENST00000459947 A0A1W2PPK0 400 aa8.81□□□□□ -1
UBR4-208ENST00000459947 SLC33A1O00400 549 aaPredicted RBP8.81□□□□□ -1
UBR4-208ENST00000459947 CRTAPO75718 401 aaPredicted RBP8.81□□□□□ -1
UBR4-208ENST00000459947 UBE2E1P51965 193 aa8.81□□□□□ -1
UBR4-208ENST00000459947 ARF6P62330 175 aa8.81□□□□□ -1
UBR4-208ENST00000459947 NEDD8Q15843 81 aa8.81□□□□□ -1
UBR4-208ENST00000459947 TBX15Q96SF7 602 aa8.81□□□□□ -1
UBR4-208ENST00000459947 TM2D1Q9BX74 207 aa8.81□□□□□ -1
UBR4-208ENST00000459947 RCC2Q9P258 522 aaKnown RBP8.81□□□□□ -1
UBR4-208ENST00000459947 STEAP1Q9UHE8 339 aa8.81□□□□□ -1
UBR4-208ENST00000459947 SESN1Q9Y6P5 492 aa8.81□□□□□ -1
UBR4-208ENST00000459947 OTOGQ6ZRI0 2925 aa8.81□□□□□ -1
UBR4-208ENST00000459947 A0A0G2JK05 382 aa8.81□□□□□ -1
UBR4-208ENST00000459947 OR7C1O76099 320 aaPredicted RBP8.81□□□□□ -1
UBR4-208ENST00000459947 RAB6AP20340 208 aa8.81□□□□□ -1
UBR4-208ENST00000459947 FUT3P21217 361 aa8.81□□□□□ -1
UBR4-208ENST00000459947 Q3ZCU0 254 aa8.81□□□□□ -1
UBR4-208ENST00000459947 C17orf107Q6ZR85 190 aa8.81□□□□□ -1
UBR4-208ENST00000459947 MOB1BQ7L9L4 216 aa8.81□□□□□ -1
UBR4-208ENST00000459947 VMO1Q7Z5L0 202 aa8.81□□□□□ -1
UBR4-208ENST00000459947 NEK7Q8TDX7 302 aa8.81□□□□□ -1
UBR4-208ENST00000459947 Q96M66 194 aa8.81□□□□□ -1
UBR4-208ENST00000459947 DPCDQ9BVM2 203 aaPredicted RBP8.81□□□□□ -1
UBR4-208ENST00000459947 TBL2Q9Y4P3 447 aaKnown RBP8.81□□□□□ -1
UBR4-208ENST00000459947 NBPF19A0A087WUL8 3843 aa8.81□□□□□ -1
UBR4-208ENST00000459947 MALRD1Q5VYJ5 2156 aa8.81□□□□□ -1
UBR4-208ENST00000459947 TRAV40A0A0B4J280 105 aa8.81□□□□□ -1
UBR4-208ENST00000459947 ODAMA1E959 279 aa8.81□□□□□ -1
UBR4-208ENST00000459947 F8VVB4 439 aa8.81□□□□□ -1
UBR4-208ENST00000459947 F8VWA3 439 aa8.81□□□□□ -1
UBR4-208ENST00000459947 CDRT1O95170 752 aa8.81□□□□□ -1
UBR4-208ENST00000459947 KRBOX4Q5JUW0 171 aa8.81□□□□□ -1
UBR4-208ENST00000459947 TRAPPC6BQ86SZ2 158 aa8.81□□□□□ -1
UBR4-208ENST00000459947 ZNF565Q8N9K5 539 aa8.81□□□□□ -1
UBR4-208ENST00000459947 OR4S1Q8NGB4 309 aa8.81□□□□□ -1
UBR4-208ENST00000459947 OR4D6Q8NGJ1 314 aa8.81□□□□□ -1
UBR4-208ENST00000459947 RAB22AQ9UL26 194 aa8.81□□□□□ -1
UBR4-208ENST00000459947 MAGEA13PA6NCF6 341 aa8.8□□□□□ -1
UBR4-208ENST00000459947 NOTOA8MTQ0 251 aa8.8□□□□□ -1
UBR4-208ENST00000459947 PDCD6O75340 191 aa8.8□□□□□ -1
UBR4-208ENST00000459947 CD36P16671 472 aa8.8□□□□□ -1
UBR4-208ENST00000459947 GZMHP20718 246 aa8.8□□□□□ -1
UBR4-208ENST00000459947 ARHGDIBP52566 201 aa8.8□□□□□ -1
UBR4-208ENST00000459947 RPL15P61313 204 aaKnown RBP8.8□□□□□ -1
UBR4-208ENST00000459947 SCN1BQ07699 218 aa8.8□□□□□ -1
UBR4-208ENST00000459947 AANATQ16613 207 aa8.8□□□□□ -1
UBR4-208ENST00000459947 PRDM13Q9H4Q3 707 aa8.8□□□□□ -1
UBR4-208ENST00000459947 C19orf12Q9NSK7 152 aa8.8□□□□□ -1
UBR4-208ENST00000459947 CLPXO76031 633 aa8.8□□□□□ -1
UBR4-208ENST00000459947 SELLP14151 372 aa8.8□□□□□ -1
UBR4-208ENST00000459947 ARSBP15848 533 aa8.8□□□□□ -1
UBR4-208ENST00000459947 CEBPDP49716 269 aaPredicted RBP8.8□□□□□ -1
UBR4-208ENST00000459947 SNU13P55769 128 aaKnown RBP8.8□□□□□ -1
UBR4-208ENST00000459947 RPS27AP62979 156 aaKnown RBP8.8□□□□□ -1
UBR4-208ENST00000459947 EDDM3AQ14507 147 aa8.8□□□□□ -1
UBR4-208ENST00000459947 P2RY14Q15391 338 aa8.8□□□□□ -1
UBR4-208ENST00000459947 TMEM200BQ69YZ2 307 aa8.8□□□□□ -1
UBR4-208ENST00000459947 OR56B1Q8NGI3 324 aa8.8□□□□□ -1
UBR4-208ENST00000459947 ZDHHC16Q969W1 377 aa8.8□□□□□ -1
UBR4-208ENST00000459947 SELENOIQ9C0D9 397 aa8.8□□□□□ -1
UBR4-208ENST00000459947 TXNL4BQ9NX01 149 aaKnown RBP8.8□□□□□ -1
UBR4-208ENST00000459947 METTL21EPA6NDL7 271 aa8.8□□□□□ -1
UBR4-208ENST00000459947 BTBD17A6NE02 478 aa8.8□□□□□ -1
UBR4-208ENST00000459947 TMEM14DPA8MWL7 114 aa8.8□□□□□ -1
UBR4-208ENST00000459947 MPIG6BO95866 241 aa8.8□□□□□ -1
UBR4-208ENST00000459947 ATAD3CQ5T2N8 411 aa8.8□□□□□ -1
UBR4-208ENST00000459947 MINOS1Q5TGZ0 78 aa8.8□□□□□ -1
UBR4-208ENST00000459947 TMEM158Q8WZ71 300 aa8.8□□□□□ -1
UBR4-208ENST00000459947 AMMECR1Q9Y4X0 333 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms