RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 F2RP25116 425 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 TIAL1Q01085 375 aaKnown RBP eCLIP8.66□□□□□ -1.02
UFD1-205ENST00000459854 HFEQ30201 348 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 MORN4Q8NDC4 146 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 VN1R17PQ8TDU5 208 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 EID2BQ96D98 161 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 KTI12Q96EK9 354 aaPredicted RBP8.66□□□□□ -1.02
UFD1-205ENST00000459854 TMEM56Q96MV1 263 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 BARX1Q9HBU1 254 aaPredicted RBP8.66□□□□□ -1.02
UFD1-205ENST00000459854 CARHSP1Q9Y2V2 147 aaKnown RBP8.66□□□□□ -1.02
UFD1-205ENST00000459854 IGSF23A1L1A6 192 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 IGF2P01344 180 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 APCSP02743 223 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 FZD5Q13467 585 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 CLEC18BQ6UXF7 455 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 CPEB3Q8NE35 698 aaKnown RBP8.66□□□□□ -1.02
UFD1-205ENST00000459854 GPBAR1Q8TDU6 330 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 SLC37A2Q8TED4 501 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 TBC1D29Q9UFV1 150 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 ING1Q9UK53 422 aaPredicted RBP8.66□□□□□ -1.02
UFD1-205ENST00000459854 HDGFL3Q9Y3E1 203 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 TICRRQ7Z2Z1 1910 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 A0A0B4J2E0 115 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 A0A1B0GX12 115 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 RER1O15258 196 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 ZFPL1O95159 310 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 VDAC1P21796 283 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 PSMB2P49721 201 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 SLC37A1P57057 533 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 IFITM3Q01628 133 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 ZNF660Q6AZW8 331 aaPredicted RBP8.65□□□□□ -1.02
UFD1-205ENST00000459854 MSRB3Q8IXL7 192 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 KCNE4Q8WWG9 221 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 RCC2Q9P258 522 aaKnown RBP8.65□□□□□ -1.02
UFD1-205ENST00000459854 KCNK7Q9Y2U2 307 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 SMPD2O60906 423 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 OTX2P32243 289 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 PCBP3P57721 371 aaKnown RBP8.65□□□□□ -1.02
UFD1-205ENST00000459854 PRTGQ2VWP7 1150 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 C20orf196Q8IYI0 205 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 NT5CQ8TCD5 201 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 GPX7Q96SL4 187 aaPredicted RBP8.65□□□□□ -1.02
UFD1-205ENST00000459854 GSN-AS1Q9NRJ2 163 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 FAM206AQ9NX38 181 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 LRP12Q9Y561 859 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 TMEM30CPA0ZSE6 113 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 NEURL1O76050 574 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 GPR3P46089 330 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 CSRP2Q16527 193 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 SPATA45Q537H7 98 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 C6orf201Q7Z4U5 140 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 MARCH3Q86UD3 253 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 STXBP6Q8NFX7 210 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 UBALD1Q8TB05 177 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 ROBO4Q8WZ75 1007 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 FAM234AQ9H0X4 552 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 PEF1Q9UBV8 284 aaKnown RBP8.65□□□□□ -1.02
UFD1-205ENST00000459854 WIPI2Q9Y4P8 454 aa8.65□□□□□ -1.02
UFD1-205ENST00000459854 A0A1W2PN81 502 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 NPIPB8E9PQR5 432 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 HS3ST1O14792 307 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 TMPRSS11DO60235 418 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 HIST1H1EP10412 219 aaKnown RBP8.65□□□□□ -1.03
UFD1-205ENST00000459854 BCL2P10415 239 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 CD46P15529 392 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 CXCL2P19875 107 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 GLRA1P23415 457 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 GUCA2BQ16661 112 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 TTC32Q5I0X7 151 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 RIPPLY2Q5TAB7 128 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 PIPOXQ9P0Z9 390 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 TTC28Q96AY4 2481 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 TRPM6Q9BX84 2022 aa8.65□□□□□ -1.03
UFD1-205ENST00000459854 A0A1B0GV90 55 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 FRG2CA6NGY1 282 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 H0YIG0 161 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 CDC14BO60729 498 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 ANKRD34CP0C6C1 535 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 MUC1P15941 1255 aaPredicted RBP8.64□□□□□ -1.03
UFD1-205ENST00000459854 NDUFB7P17568 137 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 WDR38Q5JTN6 314 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 LDLRAD3Q86YD5 345 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 LURAP1LQ8IV03 231 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 FAM181AQ8N9Y4 354 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 OR8G5Q8NG78 346 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 FBLIM1Q8WUP2 373 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 MVB12AQ96EY5 273 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 NUMA1Q14980 2115 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 PTPRZ1P23471 2315 aaPredicted RBP8.64□□□□□ -1.03
UFD1-205ENST00000459854 NDUFS8O00217 210 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 SIRPB1O00241 398 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 CA2P00918 260 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 ZNF117Q03924 483 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 OR4F17Q8NGA8 305 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 WDR34Q96EX3 536 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 STARD5Q9NSY2 213 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 P4HTMQ9NXG6 502 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 KCNE5Q9UJ90 142 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 A0A1B0GU03 582 aa8.64□□□□□ -1.03
UFD1-205ENST00000459854 SIGLEC5O15389 551 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms