RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 ARSBP15848 533 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 LMO1P25800 156 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 RPL5P46777 297 aaKnown RBP11.6□□□□□ -0.55
TIMP1-205ENST00000456754 SERPINB10P48595 397 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 NPY4RP50391 375 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 ZNF273Q14593 569 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 IL13RA2Q14627 380 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 GRK1Q15835 563 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 CR1LQ2VPA4 569 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 TIMM50Q3ZCQ8 353 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 DCAF12L2Q5VW00 463 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 SFXN4Q6P4A7 337 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 GDPGP1Q6ZNW5 385 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 CLVS1Q8IUQ0 354 aaPredicted RBP11.6□□□□□ -0.55
TIMP1-205ENST00000456754 FAM185AQ8N0U4 392 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 SUMF2Q8NBJ7 301 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 COQ2Q96H96 371 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 SNX22Q96L94 193 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 LIN7BQ9HAP6 207 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 RHOFQ9HBH0 211 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 SCOCQ9UIL1 159 aa11.6□□□□□ -0.55
TIMP1-205ENST00000456754 NSD1Q96L73 2696 aaPredicted RBP11.59□□□□□ -0.55
TIMP1-205ENST00000456754 IGHV3OR16-10A0A075B7F0 116 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 KIR2DS1A0A191URI9 304 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 ZNF780AO75290 641 aaPredicted RBP11.59□□□□□ -0.55
TIMP1-205ENST00000456754 CCL3L1P16619 93 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 GLIPR1P48060 266 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 EDDM3BP56851 147 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 RPS27AP62979 156 aaKnown RBP11.59□□□□□ -0.55
TIMP1-205ENST00000456754 AESQ08117 197 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 PAN3Q58A45 887 aaKnown RBP11.59□□□□□ -0.55
TIMP1-205ENST00000456754 NHLRC3Q5JS37 347 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 ATAD3CQ5T2N8 411 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 IDNKQ5T6J7 187 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 TPRA1Q86W33 373 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 OR8H2Q8N162 312 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 LY6G5BQ8NDX9 201 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 OR5H6Q8NGV6 325 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 TMEM59Q9BXS4 323 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 BARHL1Q9BZE3 327 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 LPAR5Q9H1C0 372 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 SEBOXQ9HB31 216 aaPredicted RBP11.59□□□□□ -0.55
TIMP1-205ENST00000456754 KCNS2Q9ULS6 477 aa11.59□□□□□ -0.55
TIMP1-205ENST00000456754 PPIAL4CA0A0B4J2A2 164 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 SOCS1O15524 211 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 UBBP0CG47 229 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 PPIAL4GP0DN37 164 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 CFPP27918 469 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 BMXP51813 675 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 ARF6P62330 175 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 PAX8Q06710 450 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 GPR176Q14439 515 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 SPCS2Q15005 226 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 MOGAT2Q3SYC2 334 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 NKAPLQ5M9Q1 402 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 FAM120AOSQ5T036 256 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 TMEM200BQ69YZ2 307 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 C5orf24Q7Z6I8 188 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 LGALS14Q8TCE9 139 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 DPCDQ9BVM2 203 aaPredicted RBP11.58□□□□□ -0.56
TIMP1-205ENST00000456754 FAM234AQ9H0X4 552 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 CST11Q9H112 138 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 C7orf69Q9H7B7 122 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 ONECUT1Q9UBC0 465 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 GHRLQ9UBU3 117 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 GLS2Q9UI32 602 aa11.58□□□□□ -0.56
TIMP1-205ENST00000456754 SOX21Q9Y651 276 aaPredicted RBP11.58□□□□□ -0.56
TIMP1-205ENST00000456754 A0A0G2JMP0 313 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 A0A0X1KG70 313 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 A0A1W2PQ09 198 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 UBE2QL1A1L167 161 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 ENSAO43768 121 aaKnown RBP11.57□□□□□ -0.56
TIMP1-205ENST00000456754 CPT2P23786 658 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 PSMD7P51665 324 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 RPL31P62899 125 aaKnown RBP11.57□□□□□ -0.56
TIMP1-205ENST00000456754 RAB12Q6IQ22 244 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 GDPD3Q7L5L3 318 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 PDZD9Q8IXQ8 264 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 Q8N7P7 452 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 OR4M2Q8NGB6 313 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 KCNG3Q8TAE7 436 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 C8orf46Q8TAG6 207 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 TBX15Q96SF7 602 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 TM2D1Q9BX74 207 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 SIRPDQ9H106 197 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 RCC2Q9P258 522 aaKnown RBP11.57□□□□□ -0.56
TIMP1-205ENST00000456754 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
TIMP1-205ENST00000456754 FOXI3A8MTJ6 420 aaPredicted RBP11.56□□□□□ -0.56
TIMP1-205ENST00000456754 MGST3O14880 152 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 MMP9P14780 707 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 CHATP28329 748 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 VEGFCP49767 419 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 DLX6P56179 175 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 P2RX3P56373 397 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 KLRD1Q13241 179 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 MPV17LQ2QL34 196 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 KLF17Q5JT82 389 aaPredicted RBP11.56□□□□□ -0.56
TIMP1-205ENST00000456754 KRBOX4Q5JUW0 171 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 UTF1Q5T230 341 aa11.56□□□□□ -0.56
TIMP1-205ENST00000456754 RSBN1Q5VWQ0 802 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms