RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ZNF281Q9Y2X9 895 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 SIRT4Q9Y6E7 314 aaPredicted RBP17.18■□□□□ 0.34
HMGB3-205ENST00000455596 IGHV2-26A0A0B4J1V2 119 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 ALDOBP05062 364 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 GLIPR1P48060 266 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 FAM189A2Q15884 450 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 SSX2Q16385 188 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 PLA1AQ53H76 456 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 OR4C13Q8NGP0 309 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 PIFOQ8TCI5 191 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 CORO2AQ92828 525 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 NR1H4Q96RI1 486 aaPredicted RBP17.17■□□□□ 0.34
HMGB3-205ENST00000455596 FAM192AQ9GZU8 254 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 TCF7L1Q9HCS4 588 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 ABCB10Q9NRK6 738 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 TAS2R3Q9NYW6 316 aa17.17■□□□□ 0.34
HMGB3-205ENST00000455596 TET2Q6N021 2002 aaPredicted RBP17.16■□□□□ 0.34
HMGB3-205ENST00000455596 LALBAP00709 142 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 GABRA5P31644 462 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 PPP3R1P63098 170 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 ST3GAL4Q11206 333 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 RSU1Q15404 277 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 KRBOX4Q5JUW0 171 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 LDLRAD2Q5SZI1 272 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 MINOS1Q5TGZ0 78 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 OR52W1Q6IF63 320 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 VCXQ9H320 206 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 RANBP3Q9H6Z4 567 aaPredicted RBP17.16■□□□□ 0.34
HMGB3-205ENST00000455596 TMEM138Q9NPI0 162 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 CNOT2Q9NZN8 540 aaKnown RBP17.16■□□□□ 0.34
HMGB3-205ENST00000455596 MINOS1-NBL1R4GNA1 71 aa17.16■□□□□ 0.34
HMGB3-205ENST00000455596 ODAMA1E959 279 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 EFCAB10A6NFE3 127 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 ANKRD65E5RJM6 399 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 H0YJX3 145 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 M0QZ24 198 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 MMP23AO75900 390 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 GNAO1P09471 354 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 KIR2DS4P43632 304 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 ATXN7L3Q14CW9 347 aaPredicted RBP17.15■□□□□ 0.34
HMGB3-205ENST00000455596 DMKNQ6E0U4 476 aaPredicted RBP17.15■□□□□ 0.34
HMGB3-205ENST00000455596 HEPN1Q6WQI6 88 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 OR51T1Q8NGJ9 327 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 NDNFQ8TB73 568 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 GHSRQ92847 366 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 COQ2Q96H96 371 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 NPFFR1Q9GZQ6 430 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 ING3Q9NXR8 418 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 TCF19Q9Y242 345 aa17.15■□□□□ 0.34
HMGB3-205ENST00000455596 CHST1O43916 411 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 CDK2P24941 298 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 BDKRB2P30411 391 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 ZNF93P35789 620 aaPredicted RBP17.14■□□□□ 0.33
HMGB3-205ENST00000455596 RAB13P51153 203 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 IL13RA2Q14627 380 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 DDI2Q5TDH0 399 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 PRAMEF5Q5TYX0 476 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 ASCL4Q6XD76 172 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 RTN4RL2Q86UN3 420 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 ZFP41Q8N8Y5 198 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 DTX3Q8N9I9 347 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 ZNF485Q8NCK3 441 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 OR13C5Q8NGS8 318 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 OR10K1Q8NGX5 313 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 CDCA4Q9BXL8 241 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 PITPNC1Q9UKF7 332 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 HILPDAQ9Y5L2 63 aa17.14■□□□□ 0.33
HMGB3-205ENST00000455596 TRBV5-5A0A0J9YX44 114 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 ZNF729A6NN14 1252 aaPredicted RBP17.13■□□□□ 0.33
HMGB3-205ENST00000455596 HSPB6O14558 160 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 XPNPEP2O43895 674 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 HTR3BO95264 441 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 HTR1DP28221 377 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 PTGFRP43088 359 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 OR3A4PP47883 348 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 DYNLT3P51808 116 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 TAS2R43P59537 309 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 Q499Y3 187 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 PAN3Q58A45 887 aaKnown RBP17.13■□□□□ 0.33
HMGB3-205ENST00000455596 YIF1BQ5BJH7 314 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 LAIR2Q6ISS4 152 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 C11orf88Q6PI97 169 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 ABHD12Q8N2K0 398 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 STX19Q8N4C7 294 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 Q8NFD4 153 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 OR4D6Q8NGJ1 314 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 OR2T6Q8NHC8 308 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 FBLIM1Q8WUP2 373 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 S100A13Q99584 98 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 NKX3-1Q99801 234 aaPredicted RBP17.13■□□□□ 0.33
HMGB3-205ENST00000455596 METTL9Q9H1A3 318 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 DCLRE1BQ9H816 532 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 PLCXD1Q9NUJ7 323 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 OR6C3Q9NZP0 311 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 PSORS1C1Q9UIG5 152 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 ING4Q9UNL4 249 aa17.13■□□□□ 0.33
HMGB3-205ENST00000455596 IGFBP3P17936 291 aaPredicted RBP17.12■□□□□ 0.33
HMGB3-205ENST00000455596 EFNB2P52799 333 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 RIPK1Q13546 671 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 PIGYQ3MUY2 71 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms