RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 MXD1Q05195 221 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 BLMHQ13867 455 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 EDDM3AQ14507 147 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 TAF9Q16594 264 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 PAN3Q58A45 887 aaKnown RBP12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 METTL11BQ5VVY1 283 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 OR2W3Q7Z3T1 314 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 CMTM4Q8IZR5 234 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 TMEM104Q8NE00 496 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 DACT3Q96B18 629 aaPredicted RBP12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM3DQ96BQ1 224 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 URM1Q9BTM9 101 aaKnown RBP12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 TMEM59Q9BXS4 323 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 BARHL1Q9BZE3 327 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 PPA2Q9H2U2 334 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 SPACA1Q9HBV2 294 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 ONECUT1Q9UBC0 465 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 CELSR1Q9NYQ6 3014 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 SMIM30A4D0T7 59 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 TMEM14DPA8MWL7 114 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 AIPO00170 330 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 TOX4O94842 621 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 ERP29P30040 261 aaKnown RBP12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 SRP14P37108 136 aaKnown RBP12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 RPL5P46777 297 aaKnown RBP12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 OR3A1P47881 315 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 CLDN12P56749 244 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 MEF2CQ06413 473 aaPredicted RBP12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 CHRFAM7AQ494W8 412 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 GPR107Q5VW38 600 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 OR10K2Q6IF99 312 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 ANKRD13BQ86YJ7 626 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 BPIFB2Q8N4F0 458 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 SUMF2Q8NBJ7 301 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 NANPQ8TBE9 248 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 Q96M66 194 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 RAB22AQ9UL26 194 aa12.06□□□□□ -0.48
NCKIPSD-207ENST00000453349 TRAV24A0A0B4J272 114 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 hADV38S2A0JD32 116 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 MCRIP1C9JLW8 97 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 HSPB6O14558 160 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 CRLF1O75462 422 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 AVPP01185 164 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 CSN2P05814 226 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 FUT3P21217 361 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 CFPP27918 469 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 KCNJ3P48549 501 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 RPS27AP62979 156 aaKnown RBP12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 QRFPP83859 136 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 AESQ08117 197 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 RBM39Q14498 530 aaKnown RBP12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM189A2Q15884 450 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 KRBOX4Q5JUW0 171 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 IL17RELQ6ZVW7 336 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 NR2C2APQ86WQ0 139 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 CROCCP3Q8IVE0 287 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 KIR3DL3Q8N743 410 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 NEK7Q8TDX7 302 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 WDFY2Q96P53 400 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 NEDD4LQ96PU5 975 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 PCGF1Q9BSM1 259 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 DPCDQ9BVM2 203 aaPredicted RBP12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 LIN7BQ9HAP6 207 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 C19orf12Q9NSK7 152 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 ING3Q9NXR8 418 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 FBLN5Q9UBX5 448 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 DAPK2Q9UIK4 370 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 KPTNQ9Y664 436 aa12.05□□□□□ -0.48
NCKIPSD-207ENST00000453349 hCG_1809904A0A1W2PP81 198 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 A0A1W2PPE2 198 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 A0A1W2PR64 198 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 A0A1W2PRV1 198 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 M0R1W7 72 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 CLEC2LP0C7M8 214 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 SLC2A2P11168 524 aaPredicted RBP12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 P2RX3P56373 397 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 VBP1P61758 197 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 UNC119Q13432 240 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 SFXN4Q6P4A7 337 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 METAP1DQ6UB28 335 aaPredicted RBP12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 C1orf122Q6ZSJ8 110 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 TPRX1Q8N7U7 411 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 TM2D1Q9BX74 207 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 KCNK15Q9H427 330 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 OPN4Q9UHM6 478 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 PEX16Q9Y5Y5 336 aa12.04□□□□□ -0.48
NCKIPSD-207ENST00000453349 MED13LQ71F56 2210 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 MAP1AP78559 2803 aaPredicted RBP12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 TRGV10A0A0A0MS01 117 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 TMEM272A0A1B0GTI8 110 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 TMEM127O75204 238 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 IL1AP01583 271 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 GLAP06280 429 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 TGFBR1P36897 503 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 RPS19P39019 145 aaKnown RBP12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 GLIPR1P48060 266 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 SERPINB10P48595 397 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 ATXN7L3Q14CW9 347 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms