RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 MTERF4Q7Z6M4 381 aaKnown RBP3.25□□□□□ -1.89
LINC00393-202ENST00000452852 GALNT10Q86SR1 603 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 GTSCR1Q86UQ5 136 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 C10orf107Q8IVU9 208 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 SKA3Q8IX90 412 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF440Q8IYI8 595 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 KIR2DL5AQ8N109 375 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 NATD1Q8N6N6 113 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 ATP6V1C2Q8NEY4 427 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 KIR2DL5BQ8NHK3 375 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 CLHC1Q8NHS4 586 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 ZFP90Q8TF47 636 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 CDS1Q92903 461 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 STMN2Q93045 179 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 MUCL1Q96DR8 90 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 ZHX1-C8orf76Q96EF9 292 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 PPP3R2Q96LZ3 170 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 TSSK3Q96PN8 268 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 STACQ99469 402 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 RHOXF2Q9BQY4 288 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 SIKE1Q9BRV8 207 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 MFFQ9GZY8 342 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 FAIMQ9NVQ4 179 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 GIN1Q9NXP7 522 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 CR1P17927 2039 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 AKAP6Q13023 2319 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 IGHV3-35A0A0C4DH35 117 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 A0A0J9YW62 118 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 A0A1W2PQD3 144 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 A6NIZ1 184 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 SRRM5B3KS81 715 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 SCAMP2O15127 329 aaKnown RBP3.24□□□□□ -1.89
LINC00393-202ENST00000452852 PLIN3O60664 434 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 LYPLA1O75608 230 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-202ENST00000452852 CLIC3O95833 236 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 CSTAP01040 98 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 IGKV1D-16P01601 117 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 HMGN2P05204 90 aaKnown RBP3.24□□□□□ -1.89
LINC00393-202ENST00000452852 PRPS1L1P21108 318 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 P2RX1P51575 399 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 RAP1BP61224 184 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 RAB11AP62491 216 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 HPCAP84074 193 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF117Q03924 483 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 FOXF1Q12946 379 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 KIAA0040Q15053 153 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 RAB11BQ15907 218 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF239Q16600 458 aaKnown RBP3.24□□□□□ -1.89
LINC00393-202ENST00000452852 TMEM176BQ3YBM2 270 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-202ENST00000452852 KLF17Q5JT82 389 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-202ENST00000452852 CCNJQ5T5M9 372 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 OR52W1Q6IF63 320 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 C3orf33Q6P1S2 294 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 C2orf66Q6UXQ4 117 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 RNF165Q6ZSG1 346 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 BHLHA15Q7RTS1 189 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF100Q8IYN0 542 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 C4orf33Q8N1A6 199 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 FNDC5Q8NAU1 212 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 OR2G2Q8NGZ5 317 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 OR5B3Q8NH48 314 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 SFXN5Q8TD22 340 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 ABHD3Q8WU67 409 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 TWIST2Q8WVJ9 160 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 TMEM234Q8WY98 164 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 CHCHD10Q8WYQ3 142 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-202ENST00000452852 OR5P2Q8WZ92 322 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 S100PBPQ96BU1 408 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 SLC25A38Q96DW6 304 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 VSIG2Q96IQ7 327 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 SORT1Q99523 831 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 TMEM246Q9BRR3 403 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 POTEKPQ9BYX7 375 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 PIGUQ9H490 435 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 BEX1Q9HBH7 125 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 CLEC5AQ9NY25 188 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 TREM2Q9NZC2 230 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 EMC3Q9P0I2 261 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 KLHL21Q9UJP4 597 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 V9GY05 133 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 DNHD1Q96M86 4753 aa3.24□□□□□ -1.89
LINC00393-202ENST00000452852 FLNAP21333 2647 aaKnown RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 SPG11Q96JI7 2443 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 SETD2Q9BYW2 2564 aaPredicted RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 NUP214P35658 2090 aaPredicted RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 IGHV3-15A0A0B4J1V0 119 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 LINC00854A0A1B0GVQ3 168 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 CIB4A0PJX0 185 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 RBMY1BA6NDE4 496 aaKnown RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 RBMY1EA6NEQ0 496 aaKnown RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 CHST1O43916 411 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 AIREO43918 545 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 LYZL6O75951 148 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 C6orf47O95873 294 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 IGHV2-5P01817 119 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 MBP02144 154 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 SHBGP04278 402 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 CRYGCP07315 174 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 RBMY1DP0C7P1 496 aaKnown RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 RBMY1A1P0DJD3 496 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms