RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 FOXJ3Q9UPW0 622 aa10.4□□□□□ -0.74
CHD3-206ENST00000452447 E9PI62 339 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 DEGS1O15121 323 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 PLXNB1O43157 2135 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 PEX14O75381 377 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 RAB3AP20336 220 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 DYNLT3P51808 116 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 IL18R1Q13478 541 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 ARSJQ5FYB0 599 aaPredicted RBP10.39□□□□□ -0.75
CHD3-206ENST00000452447 KRBOX4Q5JUW0 171 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 ABHD12Q8N2K0 398 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 CHST4Q8NCG5 386 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 GPER1Q99527 375 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 ZNF649Q9BS31 505 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 PRSS22Q9GZN4 317 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 MRPS18AQ9NVS2 196 aaKnown RBP10.39□□□□□ -0.75
CHD3-206ENST00000452447 ING3Q9NXR8 418 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 SMPD3Q9NY59 655 aaPredicted RBP10.39□□□□□ -0.75
CHD3-206ENST00000452447 TAS2R3Q9NYW6 316 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 A0A0G2JK05 382 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 A6NDX4 124 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 MMP23AO75900 390 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 CSN2P05814 226 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 CD2P06729 351 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 CDK2P24941 298 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 GLIPR1P48060 266 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 MTNR1BP49286 362 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 ZP1P60852 638 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 PRAMEF5Q5TYX0 476 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 ZNF691Q5VV52 312 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 LPCAT4Q643R3 524 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 CCBE1Q6UXH8 406 aaPredicted RBP10.39□□□□□ -0.75
CHD3-206ENST00000452447 RTN4RL2Q86UN3 420 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 SATL1Q86VE3 508 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 ZNF596Q8TC21 504 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 APH1BQ8WW43 257 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 RDH12Q96NR8 316 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
CHD3-206ENST00000452447 ODAMA1E959 279 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 SLC33A1O00400 549 aaPredicted RBP10.38□□□□□ -0.75
CHD3-206ENST00000452447 DCKP27707 260 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 PTGFRP43088 359 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 SOX2P48431 317 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 ARHGDIBP52566 201 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 HABP2Q14520 560 aaPredicted RBP10.38□□□□□ -0.75
CHD3-206ENST00000452447 ATXN7L3Q14CW9 347 aaPredicted RBP10.38□□□□□ -0.75
CHD3-206ENST00000452447 Q6P435 159 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 RPL22L1Q6P5R6 122 aaKnown RBP10.38□□□□□ -0.75
CHD3-206ENST00000452447 HEPN1Q6WQI6 88 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 TMPRSS11AQ6ZMR5 421 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 PACRGLQ8N7B6 248 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 OR4D6Q8NGJ1 314 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 OR4P4Q8NGL7 312 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 CFHR4Q92496 578 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 CORO2AQ92828 525 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 NR1H4Q96RI1 486 aaPredicted RBP10.38□□□□□ -0.75
CHD3-206ENST00000452447 DPM3Q9P2X0 92 aa10.38□□□□□ -0.75
CHD3-206ENST00000452447 IRGMA1A4Y4 181 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 MEGF11A6BM72 1044 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 FAM172BPA6NC97 362 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 H0YJX3 145 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 TOR1AO14656 332 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 CASQ2O14958 399 aaPredicted RBP10.37□□□□□ -0.75
CHD3-206ENST00000452447 WBP4O75554 376 aaKnown RBP10.37□□□□□ -0.75
CHD3-206ENST00000452447 LIMS3P0CW19 117 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 LIMS4P0CW20 117 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 JUNBP17275 347 aaPredicted RBP10.37□□□□□ -0.75
CHD3-206ENST00000452447 BRS3P32247 399 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 CDK5R1Q15078 307 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 SMN1Q16637 294 aaKnown RBP10.37□□□□□ -0.75
CHD3-206ENST00000452447 CCDC58Q4VC31 144 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 Q8N2B8 174 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 PXT1Q8NFP0 134 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 GPR148Q8TDV2 347 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 TNFAIP8L1Q8WVP5 186 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 CREB3L1Q96BA8 519 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 JAM3Q9BX67 310 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 FAM192AQ9GZU8 254 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 FGF20Q9NP95 211 aaPredicted RBP10.37□□□□□ -0.75
CHD3-206ENST00000452447 SERTAD4Q9NUC0 356 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 OR6C3Q9NZP0 311 aa10.37□□□□□ -0.75
CHD3-206ENST00000452447 ZNF729A6NN14 1252 aaPredicted RBP10.36□□□□□ -0.75
CHD3-206ENST00000452447 LEUTXA8MZ59 168 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 HSPB6O14558 160 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 FBXO24O75426 580 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 ALDOBP05062 364 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 MYL12AP19105 171 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 CEACAM3P40198 252 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 VHLP40337 213 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 HSPA13P48723 471 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 PRRX1P54821 245 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 BDH1Q02338 343 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 RSU1Q15404 277 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 PAN3Q58A45 887 aaKnown RBP10.36□□□□□ -0.75
CHD3-206ENST00000452447 HIST2H2BDQ6DRA6 164 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 ELP2Q6IA86 826 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 ZNF565Q8N9K5 539 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 OR51A2Q8NGJ7 313 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 CAPSLQ8WWF8 208 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 CYGBQ8WWM9 190 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms