RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 STAG3L4Q8TBR4 150 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 LGALS14Q8TCE9 139 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 ADIPOR1Q96A54 375 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 ESAMQ96AP7 390 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 SARAFQ96BY9 339 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 TVP23CQ96ET8 276 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 Q96MF0 132 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZFP3Q96NJ6 502 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 UHRF2Q96PU4 802 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 PANX1Q96RD7 426 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 RASL10BQ96S79 203 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 TBL1YQ9BQ87 522 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 CCDC3Q9BQI4 270 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 SRSF8Q9BRL6 282 aaKnown RBP3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 CHST6Q9GZX3 395 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 CDT1Q9H211 546 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 OR52D1Q9H346 318 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 MTHFD2LQ9H903 347 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 PATZ1Q9HBE1 687 aaKnown RBP3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 LRTM1Q9HBL6 345 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 MRPL22Q9NWU5 206 aaKnown RBP3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 BET1LQ9NYM9 111 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 WSB2Q9NYS7 404 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 FLRT3Q9NZU0 649 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 ABI3Q9P2A4 366 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 THAP10Q9P2Z0 257 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 KLK11Q9UBX7 282 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 ST6GALNAC2Q9UJ37 374 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 PILRBQ9UKJ0 227 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 FBXW2Q9UKT8 454 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 DHDHQ9UQ10 334 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 PSG8Q9UQ74 426 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 PTRH2Q9Y3E5 179 aaKnown RBP3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 NUP214P35658 2090 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 NINQ8N4C6 2090 aa3.12□□□□□ -1.91
HMGB3P8-201ENST00000449709 NLRC5Q86WI3 1866 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF831Q5JPB2 1677 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ANAPC1Q9H1A4 1944 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 SCN1AP35498 2009 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 SAA2-SAA4A0A096LPE2 208 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 TRAV1-1A0A0B4J248 108 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 TRBV4-1A0A0J9YWV2 114 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 A0A1W2PR80 420 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 A6NIN4 97 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 C4orf47A7E2U8 309 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF727A8MUV8 499 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 G3V3Y1 287 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 H3BN98 237 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 AGPAT2O15120 278 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 LATO43561 262 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 RAMP2O60895 175 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF217O75362 1048 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 SAP30O75446 220 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 RBMXL2O75526 392 aaKnown RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ARL6IP5O75915 188 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 JTBO76095 146 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 GJB5O95377 273 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 HLA-DRB1P01911 266 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 MMP7P09237 267 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 MPC1LP0DKB6 136 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 IRF1P10914 325 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 PSG2P11465 335 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 AKR1C4P17516 323 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 AZU1P20160 251 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 EDN2P20800 178 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 FUT3P21217 361 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 CD34P28906 385 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 TSPOP30536 169 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 CDAP32320 146 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 S100A3P33764 101 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 MFAP4P55083 255 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 RIPPLY3P57055 190 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 TAS2R20P59543 309 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 CKS1BP61024 79 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 RPS14P62263 151 aaKnown RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 LCN2P80188 198 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF763Q0D2J5 394 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 CAPSQ13938 189 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ENDOGQ14249 297 aaKnown RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 GPNMBQ14956 572 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 EXT1Q16394 746 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ACSF3Q4G176 576 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF585BQ52M93 769 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ABHD17BQ5VST6 288 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 RAET1LQ5VY80 246 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 PMS2CLQ68D20 193 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 SLC8B1Q6J4K2 584 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF474Q6S9Z5 364 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF562Q6V9R5 426 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 GLT6D1Q7Z4J2 308 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF429Q86V71 674 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 TMEM173Q86WV6 379 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 RBM45Q8IUH3 476 aaKnown RBP3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 TUSC5Q8IXB3 177 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 KRTCAP2Q8N6L1 136 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 TMEM217Q8N7C4 229 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 C5orf17Q8NAS9 161 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 SUMF2Q8NBJ7 301 aa3.11□□□□□ -1.91
HMGB3P8-201ENST00000449709 NECAP1Q8NC96 275 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms