RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MPV17LQ2QL34 196 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 C1orf185Q5T7R7 199 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 FBXW12Q6X9E4 464 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 ZGRF1Q86YA3 2104 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 CISD2Q8N5K1 135 aaKnown RBP13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 OR10C1Q96KK4 312 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 C1orf123Q9NWV4 160 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 RCC2Q9P258 522 aaKnown RBP13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 BCL2L11O43521 198 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 RLN2P04090 185 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 NMBP08949 121 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 HOXB5P09067 269 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 PRKACAP17612 351 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 HOXC12P31275 282 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 PPP1CBP62140 327 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 ALKBH6Q3KRA9 238 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 Q8NA96 180 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 SHANK1Q9Y566 2161 aa13.73□□□□□ -0.21
AP000253.1-201ENST00000449339 TRBV6-7A0A0A0MS04 114 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 KCNAB3O43448 404 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 CBR1P16152 277 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 DUSP1P28562 367 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 UBA52P62987 128 aaKnown RBP13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 ST8SIA2Q92186 375 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 DCUN1D4Q92564 292 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 ZNF488Q96MN9 340 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 RNF126Q9BV68 326 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 PLK3Q9H4B4 646 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 POM121CA8CG34 1229 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 HSPB6O14558 160 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 NAPSAO96009 420 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 GLP1RP43220 463 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 IL24Q13007 206 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 ABCA11PQ4W5N1 156 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 ZNF324BQ6AW86 544 aaPredicted RBP13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 C1orf162Q8NEQ5 155 aaPredicted RBP13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 SLC25A40Q8TBP6 338 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 C2orf50Q96LR7 162 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 OR51I2Q9H344 312 aa13.72□□□□□ -0.21
AP000253.1-201ENST00000449339 H0YIZ8 118 aa13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 IGKV3-15P01624 115 aa13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 LUMP51884 338 aaPredicted RBP13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 IGSF11Q5DX21 431 aa13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 TOR2AQ5JU69 321 aa13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 ZNF474Q6S9Z5 364 aaPredicted RBP13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 BHLHA15Q7RTS1 189 aaPredicted RBP13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 NEK7Q8TDX7 302 aa13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 MOB3AQ96BX8 217 aa13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 PKIBQ9C010 78 aa13.71□□□□□ -0.21
AP000253.1-201ENST00000449339 HEATR1Q9H583 2144 aaKnown RBP13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 RHBDL1O75783 438 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 UCP2P55851 309 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 P2RX3P56373 397 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 KRTCAP3Q53RY4 240 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 ALKBH2Q6NS38 261 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 Q6ZS49 121 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 LINC00596Q86U02 117 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 POC1AQ8NBT0 407 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 OR1J1Q8NGS3 322 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 ANGPTL6Q8NI99 470 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 FAM57AQ8TBR7 257 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 RTN4IP1Q8WWV3 396 aaPredicted RBP13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 PIK3IP1Q96FE7 263 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 ZNF471Q9BX82 626 aaPredicted RBP13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 SLC2A9Q9NRM0 540 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 GSKIPQ9P0R6 139 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 KCNIP3Q9Y2W7 256 aa13.71□□□□□ -0.22
AP000253.1-201ENST00000449339 FAM87AP0C7U9 286 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 CECR9P0C854 216 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 TDGF1P3P51864 188 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 IL15RAQ13261 267 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 RBM39Q14498 530 aaKnown RBP13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 SRSF7Q16629 238 aaKnown RBP eCLIP13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 PRR30Q53SZ7 412 aaPredicted RBP13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 FAM58AQ8N1B3 248 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 C17orf78Q8N4C9 275 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 OR5T2Q8NGG2 359 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 RTL8AQ9BWD3 113 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 SPACA1Q9HBV2 294 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 Q9N2K0 584 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 RAXQ9Y2V3 346 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 TLN1Q9Y490 2541 aaKnown RBP13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 I3L521 148 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 AADACP22760 399 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 MPV17P39210 176 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 UCP3P55916 312 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 PRSS54Q6PEW0 395 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 SLC38A6Q8IZM9 456 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 RRNAD1Q96FB5 475 aaKnown RBP13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 GALNT14Q96FL9 552 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 BOD1Q96IK1 185 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 CXorf58Q96LI9 332 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 NAA60Q9H7X0 242 aa13.7□□□□□ -0.22
AP000253.1-201ENST00000449339 IGHV3-64DA0A0J9YX35 117 aa13.69□□□□□ -0.22
AP000253.1-201ENST00000449339 LOC105371267A0A1B0GV96 52 aa13.69□□□□□ -0.22
AP000253.1-201ENST00000449339 F5H0A9 414 aaPredicted RBP13.69□□□□□ -0.22
AP000253.1-201ENST00000449339 J3QT63 122 aa13.69□□□□□ -0.22
AP000253.1-201ENST00000449339 PPYP01298 95 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms