RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 C17orf107Q6ZR85 190 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 TRAPPC6BQ86SZ2 158 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 MS4A15Q8N5U1 240 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 OR4S1Q8NGB4 309 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 C1orf147Q96MC9 270 aaPredicted RBP11.93□□□□□ -0.5
USP39-206ENST00000448971 NR1H4Q96RI1 486 aaPredicted RBP11.93□□□□□ -0.5
USP39-206ENST00000448971 METTL9Q9H1A3 318 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 PPA2Q9H2U2 334 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 ZMAT3Q9HA38 289 aaKnown RBP11.93□□□□□ -0.5
USP39-206ENST00000448971 NOX4Q9NPH5 578 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 ING4Q9UNL4 249 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 FOXJ3Q9UPW0 622 aa11.93□□□□□ -0.5
USP39-206ENST00000448971 A0A0U1RQK1 487 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 hADV38S2A0JD32 116 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 HSPB6O14558 160 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 MGST3O14880 152 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 CDRT1O95170 752 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 PTGFRP43088 359 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 MAP2K4P45985 399 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 OR3A1P47881 315 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 TBCEQ15813 527 aaPredicted RBP11.92□□□□□ -0.5
USP39-206ENST00000448971 TREML4Q6UXN2 200 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 ZNF782Q6ZMW2 699 aaPredicted RBP11.92□□□□□ -0.5
USP39-206ENST00000448971 NKAIN3Q8N8D7 197 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 CHST4Q8NCG5 386 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 MUL1Q969V5 352 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 SEBOXQ9HB31 216 aaPredicted RBP11.92□□□□□ -0.5
USP39-206ENST00000448971 TCF7L1Q9HCS4 588 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 ING3Q9NXR8 418 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 FAM96BQ9Y3D0 163 aa11.92□□□□□ -0.5
USP39-206ENST00000448971 DEGS1O15121 323 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 NPFFO15130 113 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 HOXA3O43365 443 aaPredicted RBP11.91□□□□□ -0.5
USP39-206ENST00000448971 GPX5O75715 221 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 PAHP00439 452 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 COX7A1P24310 79 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 P2RX3P56373 397 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 ERVFRD-1P60508 538 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 GABARAPL2P60520 117 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 MLLT11Q13015 90 aaPredicted RBP11.91□□□□□ -0.5
USP39-206ENST00000448971 IL13RA2Q14627 380 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 INSL4Q14641 139 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 ATXN7L3Q14CW9 347 aaPredicted RBP11.91□□□□□ -0.5
USP39-206ENST00000448971 PIGYQ3MUY2 71 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 ACSM3Q53FZ2 586 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 AWAT2Q6E213 333 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 ELP2Q6IA86 826 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 C1orf122Q6ZSJ8 110 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 ZNF367Q7RTV3 350 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 PNKDQ8N490 385 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 TNFRSF14Q92956 283 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 SLC25A28Q96A46 364 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 ZNF714Q96N38 554 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 TNFRSF19Q9NS68 423 aa11.91□□□□□ -0.5
USP39-206ENST00000448971 MRPS28Q9Y2Q9 187 aaKnown RBP11.91□□□□□ -0.5
USP39-206ENST00000448971 MEIOCA2RUB1 952 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 FUOMA2VDF0 154 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 SLC33A1O00400 549 aaPredicted RBP11.9□□□□□ -0.5
USP39-206ENST00000448971 PIN1P1O15428 100 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 ZNF780AO75290 641 aaPredicted RBP11.9□□□□□ -0.5
USP39-206ENST00000448971 FBP1P09467 338 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 ZNF728P0DKX0 622 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 SAA4P35542 130 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 UBE2E1P51965 193 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 RPS25P62851 125 aaKnown RBP11.9□□□□□ -0.5
USP39-206ENST00000448971 MEF2CQ06413 473 aaPredicted RBP11.9□□□□□ -0.5
USP39-206ENST00000448971 SLC22A6Q4U2R8 563 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 HSD17B12Q53GQ0 312 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 PAN3Q58A45 887 aaKnown RBP11.9□□□□□ -0.5
USP39-206ENST00000448971 FAM27D1Q5T7N8 215 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 OSR2Q8N2R0 312 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 TMEM203Q969S6 136 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 UNKLQ9H9P5 680 aaKnown RBP11.9□□□□□ -0.5
USP39-206ENST00000448971 PCDHB16Q9NRJ7 776 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 IL36GQ9NZH8 169 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 SF3B6Q9Y3B4 125 aaKnown RBP11.9□□□□□ -0.5
USP39-206ENST00000448971 LINC00312Q9Y6C7 94 aa11.9□□□□□ -0.5
USP39-206ENST00000448971 TRGV10A0A0A0MS01 117 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 A0A0G2JK05 382 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 CLPXO76031 633 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 OR7C1O76099 320 aaPredicted RBP11.89□□□□□ -0.51
USP39-206ENST00000448971 MELTFP08582 738 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 PSMA1P25786 263 aaKnown RBP11.89□□□□□ -0.51
USP39-206ENST00000448971 LMO1P25800 156 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 RBM11P57052 281 aaKnown RBP11.89□□□□□ -0.51
USP39-206ENST00000448971 AESQ08117 197 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 GPR50Q13585 617 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 SLC9A3R2Q15599 337 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 KRBOX4Q5JUW0 171 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 Q6P435 159 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 GLIPR1L1Q6UWM5 242 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 TCF23Q7RTU1 214 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 CEACAM19Q7Z692 300 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 OR51T1Q8NGJ9 327 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 MGLLQ99685 303 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 SLITRK2Q9H156 845 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 HEXA-AS1Q9H8Q6 139 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 ISYNA1Q9NPH2 558 aa11.89□□□□□ -0.51
USP39-206ENST00000448971 ST3GAL6Q9Y274 331 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms