RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 TECRQ9NZ01 308 aaKnown RBP6.87□□□□□ -1.31
NEDD9-204ENST00000448183 TRAV8-7A0A075B6U6 113 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 TRDCB7Z8K6 153 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 MKRN2OSH3BPM6 223 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 PPYP01298 95 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 HOXC4P09017 264 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-204ENST00000448183 SRD5A2P31213 254 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 SULT1A2P50226 295 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 Q56UQ5 140 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 SPINK9Q5DT21 86 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 LILRA6Q6PI73 481 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 CARFQ8N187 725 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 C10orf111Q8N326 155 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 OR5AU1Q8NGC0 362 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 OR4S2Q8NH73 311 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 OR10D3Q8NH80 312 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 BLNKQ8WV28 456 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 SLC2A9Q9NRM0 540 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 TRAV17A0A0B4J275 112 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 CTGFP29279 349 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
NEDD9-204ENST00000448183 PSG6Q00889 435 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 EWSR1Q01844 656 aaKnown RBP eCLIP6.87□□□□□ -1.31
NEDD9-204ENST00000448183 IL11RAQ14626 422 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 DPPA3Q6W0C5 159 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 SPNS3Q6ZMD2 512 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 TGIF2LXQ8IUE1 241 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 MRGPRDQ8TDS7 321 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 ASB5Q8WWX0 329 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 RAB24Q969Q5 203 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 RPEQ96AT9 228 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 FBXO17Q96EF6 278 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 P4HTMQ9NXG6 502 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 TNFSF18Q9UNG2 199 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF831Q5JPB2 1677 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 BCORQ6W2J9 1755 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 IGHV1OR21-1A0A087WYE8 117 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 IGHV3-43A0A0B4J1X8 118 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 A0A1W2PQD3 144 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 MEX3AA1L020 520 aaKnown RBP6.87□□□□□ -1.31
NEDD9-204ENST00000448183 SSC5DA1L4H1 1573 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 IGHV3-43DP0DP04 118 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 PKIAP61925 76 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 FOXO1Q12778 655 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 TRA2AQ13595 282 aaKnown RBP eCLIP6.87□□□□□ -1.31
NEDD9-204ENST00000448183 DEFB109BQ30KR1 87 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 FAM209AQ5JX71 171 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 C1QL3Q5VWW1 255 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 LHX8Q68G74 356 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF383Q8NA42 475 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 LRRC29Q8WV35 223 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 VSTM2LQ96N03 204 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 MFRPQ9BY79 579 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 FUT9Q9Y231 359 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 hADV38S2A0JD32 116 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 PATE4P0C8F1 98 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 OR10J1P30954 320 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 PPOXP50336 477 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 CD226Q15762 336 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 ANKRD55Q3KP44 614 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 ACER2Q5QJU3 275 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF880Q6PDB4 577 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 SLC35E3Q7Z769 313 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 DTD1Q8TEA8 209 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 STARD4Q96DR4 205 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 POM121Q96HA1 1249 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 HSD17B10Q99714 261 aaKnown RBP6.86□□□□□ -1.31
NEDD9-204ENST00000448183 GAL3ST2Q9H3Q3 398 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 OR6C3Q9NZP0 311 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 DOK5Q9P104 306 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 PCDHGA9Q9Y5G4 932 aaKnown RBP6.86□□□□□ -1.31
NEDD9-204ENST00000448183 SHISA7A6NL88 538 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 CD160O95971 181 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 PGA4P0DJD7 388 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 PGA5P0DJD9 388 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 BCL3P20749 454 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 TCL1AP56279 114 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 RAC3P60763 192 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 LSM11P83369 360 aaKnown RBP eCLIP6.86□□□□□ -1.313e-7■■□□□ 13
NEDD9-204ENST00000448183 NAAAQ02083 359 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF260Q3ZCT1 412 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 Q6ZS52 159 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 GAPTQ8N292 157 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 VSTM2AQ8TAG5 236 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 DPF1Q92782 380 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 SMDT1Q9H4I9 107 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 OR2T8A6NH00 312 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 PRSS1P07477 247 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 ACAA1P09110 424 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-204ENST00000448183 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF25P17030 456 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-204ENST00000448183 UBE2V2Q15819 145 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 LYPD8Q6UX82 237 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 C16orf47Q6ZP98 133 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-204ENST00000448183 PDPNQ86YL7 162 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 R3HDM4Q96D70 268 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 DCAF16Q9NXF7 216 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 THYN1Q9P016 225 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 WASHC3Q9Y3C0 194 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 SMCHD1A6NHR9 2005 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms