RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 ARL9Q6T311 187 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 TMEM91Q6ZNR0 172 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 Q6ZS52 159 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ZNF550Q7Z398 422 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ZNF440Q8IYI8 595 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 CADM2Q8N3J6 435 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ARIH2OSQ8N7S6 290 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 GDPD1Q8N9F7 314 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 CYB561A3Q8NBI2 242 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 C19orf18Q8NEA5 215 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 OR52E2Q8NGJ4 325 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 OR5W2Q8NH69 310 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 OR4C6Q8NH72 309 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 OR56B4Q8NH76 319 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ENKURQ8TC29 256 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 DNAJA4Q8WW22 397 aaPredicted RBP3.18□□□□□ -1.9
VPS29-202ENST00000447578 KIAA1143Q96AT1 154 aaPredicted RBP3.18□□□□□ -1.9
VPS29-202ENST00000447578 SGTBQ96EQ0 304 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ERMAPQ96PL5 475 aaPredicted RBP3.18□□□□□ -1.9
VPS29-202ENST00000447578 TBX15Q96SF7 602 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ZNF649Q9BS31 505 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 TTTY10Q9BZA0 68 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 SLC22A4Q9H015 551 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 BABAM2Q9NXR7 383 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 RPS6KB2Q9UBS0 482 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 NUP50Q9UKX7 468 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 MMP17Q9ULZ9 603 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 BAIAP2Q9UQB8 552 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 SIGLEC7Q9Y286 467 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 N6AMT1Q9Y5N5 214 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 LRRK1Q38SD2 2015 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 DOCK6Q96HP0 2047 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 PIKFYVEQ9Y2I7 2098 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 A0A0B4J2E0 115 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 SPTY2D1-AS1A0A0U1RR47 76 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 A0A1B0GX12 115 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 DHRS7CA6NNS2 312 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ZNF705EA8MWA4 302 aaPredicted RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 K7ENP7 123 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 PLA2G10O15496 165 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 SLC19A2O60779 497 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 CTNSO60931 367 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 NDUFB2O95178 105 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 CSTAP01040 98 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 IFNA16P05015 189 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 GYPBP06028 91 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 IFI6P09912 130 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 VDAC1P21796 283 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 F8A1P23610 371 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 MYL9P24844 172 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 SHC1P29353 583 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 OTX1P32242 354 aaPredicted RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 RBM34P42696 430 aaKnown RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 RPS5P46782 204 aaKnown RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 HCCSP53701 268 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 PSMD4P55036 377 aaKnown RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 CTBP2P56545 445 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 OR10A3P58181 314 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 OR12D2P58182 307 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 TAS2R43P59537 309 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 SKP1P63208 163 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ACTC1P68032 377 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ACTA1P68133 377 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 BTG2P78543 158 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 MRPS15P82914 257 aaKnown RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 ASAH1Q13510 395 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 FAM53BQ14153 422 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 QPRTQ15274 297 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 TRAM1Q15629 374 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ZNF141Q15928 474 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ISXQ2M1V0 245 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ATAD3CQ5T2N8 411 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 OR5M10Q6IEU7 315 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ULK3Q6PHR2 472 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 PLET1Q6UQ28 207 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 NPSR1Q6W5P4 371 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 RTL4Q6ZR62 310 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 DNM1P46Q6ZS02 220 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ACOT7LQ6ZUV0 252 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 PGAP1Q75T13 922 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 OAFQ86UD1 273 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 SLC25A42Q86VD7 318 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 Q8N377 158 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 COMMD1Q8N668 190 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 TPRX1Q8N7U7 411 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 GATSQ8NAP1 163 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 TSTD1Q8NFU3 115 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 OR5J2Q8NH18 312 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 OR4K13Q8NH42 304 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 LMX1AQ8TE12 382 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 FAM222BQ8WU58 562 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 CAPSLQ8WWF8 208 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 ZNF578Q96N58 590 aaPredicted RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 OXGR1Q96P68 337 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 TEAD3Q99594 435 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 HDHD2Q9H0R4 259 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 AUNIPQ9H7T9 357 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 GNB4Q9HAV0 340 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 TMEM165Q9HC07 324 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 CMC2Q9NRP2 79 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms