RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 CD2P06729 351 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 ZNF44P15621 663 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 RAB3AP20336 220 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 PAX6P26367 422 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 BRS3P32247 399 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 CEACAM3P40198 252 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 KCNJ3P48549 501 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 RAB13P51153 203 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 PAX5Q02548 391 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 ZNF691Q5VV52 312 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 ASCL4Q6XD76 172 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 TMPRSS11AQ6ZMR5 421 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 KLHDC1Q8N7A1 406 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 ZNF565Q8N9K5 539 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 OR51T1Q8NGJ9 327 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 NDNFQ8TB73 568 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 AKR1E2Q96JD6 320 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 SPACA5Q96QH8 159 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 AMBNQ9NP70 447 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 SERTAD4Q9NUC0 356 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 SMPD3Q9NY59 655 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-203ENST00000446922 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-203ENST00000446922 AASSQ9UDR5 926 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 SIGLEC9Q9Y336 463 aa12.53□□□□□ -0.4
HMGB2-203ENST00000446922 ODAMA1E959 279 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 LEUTXA8MZ59 168 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 OOSP1A8MZH6 123 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 E9PI62 339 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 F2RL2O00254 374 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-203ENST00000446922 OPN1MWP04001 364 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 LIMS3P0CW19 117 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 LIMS4P0CW20 117 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 OPN1MW2P0DN77 364 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 OPN1MW3P0DN78 364 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 CDK2P24941 298 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 GLIPR1P48060 266 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 PRRX1P54821 245 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 SLC34A1Q06495 639 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 AESQ08117 197 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 IL13RA2Q14627 380 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 CDK5R1Q15078 307 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 ZSCAN26Q16670 478 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 OR4D6Q8NGJ1 314 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 OR5D18Q8NGL1 313 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 OR4P4Q8NGL7 312 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 GPR148Q8TDV2 347 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
HMGB2-203ENST00000446922 NKX3-1Q99801 234 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-203ENST00000446922 PDCD1LG2Q9BQ51 273 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 BARHL1Q9BZE3 327 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 WNT10AQ9GZT5 417 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 LINC00574Q9H8X3 128 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 HILPDAQ9Y5L2 63 aa12.52□□□□□ -0.41
HMGB2-203ENST00000446922 TET2Q6N021 2002 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-203ENST00000446922 MEX3AA1L020 520 aaKnown RBP12.51□□□□□ -0.41
HMGB2-203ENST00000446922 WBP4O75554 376 aaKnown RBP12.51□□□□□ -0.41
HMGB2-203ENST00000446922 CALCBP10092 127 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 PTGFRP43088 359 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 SNU13P55769 128 aaKnown RBP12.51□□□□□ -0.41
HMGB2-203ENST00000446922 SCN1BQ07699 218 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 MED21Q13503 144 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 TTC23Q5W5X9 447 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 SLC16A12Q6ZSM3 486 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 FAM110DQ8TAY7 271 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-203ENST00000446922 WIPF2Q8TF74 440 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-203ENST00000446922 APH1BQ8WW43 257 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 LIN7BQ9HAP6 207 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 PCDHB16Q9NRJ7 776 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 FOXJ3Q9UPW0 622 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 WNK1Q9H4A3 2382 aa12.51□□□□□ -0.41
HMGB2-203ENST00000446922 KBTBD11-OT1A0A1B0GTJ5 212 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 TOR1AO14656 332 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 OGG1O15527 345 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 MMP23AO75900 390 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 CGB3P0DN86 165 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 CGB7P0DN87 165 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 VSIG10L2P0DP72 767 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 C21orf33P30042 268 aaPredicted RBP12.5□□□□□ -0.41
HMGB2-203ENST00000446922 PLA1AQ53H76 456 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 NHLRC3Q5JS37 347 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 CCDC144NLQ6NUI1 221 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 RNF144BQ7Z419 303 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 TMEM219Q86XT9 240 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 NDUFA11Q86Y39 141 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 PACRGLQ8N7B6 248 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 OR10A7Q8NGE5 316 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 STMN2Q93045 179 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 COQ2Q96H96 371 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 GPER1Q99527 375 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 IFT22Q9H7X7 185 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 PAK1IP1Q9NWT1 392 aaPredicted RBP12.5□□□□□ -0.41
HMGB2-203ENST00000446922 BABAM2Q9NXR7 383 aa12.5□□□□□ -0.41
HMGB2-203ENST00000446922 EXOSC1Q9Y3B2 195 aaKnown RBP12.5□□□□□ -0.41
HMGB2-203ENST00000446922 H0YJX3 145 aa12.49□□□□□ -0.41
HMGB2-203ENST00000446922 BUB1B-PAK6H3BSN5 160 aa12.49□□□□□ -0.41
HMGB2-203ENST00000446922 FBXO24O75426 580 aa12.49□□□□□ -0.41
HMGB2-203ENST00000446922 GPX5O75715 221 aa12.49□□□□□ -0.41
HMGB2-203ENST00000446922 BAG2O95816 211 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms