RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 BEND4Q6ZU67 534 aa14.85□□□□□ -0.03
SMC6-206ENST00000446852 SPACA3Q8IXA5 215 aa14.85□□□□□ -0.03
SMC6-206ENST00000446852 NEK7Q8TDX7 302 aa14.85□□□□□ -0.03
SMC6-206ENST00000446852 NMES1Q9C002 83 aa14.85□□□□□ -0.03
SMC6-206ENST00000446852 SELEP16581 610 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 IL13RA2Q14627 380 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 ZNF474Q6S9Z5 364 aaPredicted RBP14.84□□□□□ -0.03
SMC6-206ENST00000446852 TP53TG5Q9Y2B4 290 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 RNF222A6NCQ9 220 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 HS3ST1O14792 307 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 AADACP22760 399 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 PIGPP57054 158 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 SGPP2Q8IWX5 399 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 RDH5Q92781 318 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 MOB3AQ96BX8 217 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 OR10C1Q96KK4 312 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 OBP2BQ9NPH6 170 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 MBD2Q9UBB5 411 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 TINAGQ9UJW2 476 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 WASF3Q9UPY6 502 aa14.84□□□□□ -0.03
SMC6-206ENST00000446852 ARID1AO14497 2285 aa14.83□□□□□ -0.03
SMC6-206ENST00000446852 ZGRF1Q86YA3 2104 aa14.83□□□□□ -0.03
SMC6-206ENST00000446852 IGHV2OR16-5A0A0B4J2B6 119 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 CDIPTO14735 213 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 MLNRO43193 412 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 ERVK11-1P61568 191 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 C20orf204Q6ZNR8 217 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 SPACA1Q9HBV2 294 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 SLC25A15Q9Y619 301 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 TEX13DA0A0J9YY54 714 aaPredicted RBP14.83□□□□□ -0.04
SMC6-206ENST00000446852 SCTP09683 121 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 PSMB6P28072 239 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 GLP1RP43220 463 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 HERPUD1Q15011 391 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 OR8G1Q15617 311 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 SRSF7Q16629 238 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMC6-206ENST00000446852 FAM180AQ6UWF9 173 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 METTL8Q9H825 291 aaKnown RBP14.83□□□□□ -0.04
SMC6-206ENST00000446852 PURGQ9UJV8 347 aaKnown RBP14.83□□□□□ -0.04
SMC6-206ENST00000446852 FZR1Q9UM11 496 aa14.83□□□□□ -0.04
SMC6-206ENST00000446852 CADP27708 2225 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 HOXB5P09067 269 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 ZNF324BQ6AW86 544 aaPredicted RBP14.82□□□□□ -0.04
SMC6-206ENST00000446852 Q6P435 159 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 THAP6Q8TBB0 222 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 MRPL30Q8TCC3 161 aaKnown RBP14.82□□□□□ -0.04
SMC6-206ENST00000446852 IFT22Q9H7X7 185 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 SLC2A9Q9NRM0 540 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 KCNAB3O43448 404 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 PPYP01298 95 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 PGA5P0DJD9 388 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 TIMP3P35625 211 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 RBMXP38159 391 aaKnown RBP14.82□□□□□ -0.04
SMC6-206ENST00000446852 CYCSP99999 105 aaKnown RBP14.82□□□□□ -0.04
SMC6-206ENST00000446852 ZNF345Q14585 488 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 PHLDA2Q53GA4 152 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 KRTCAP3Q53RY4 240 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 CLLU1Q5K131 121 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 FAM219AQ8IW50 185 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 KCNRGQ8N5I3 272 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 OR8G5Q8NG78 346 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 FAM57AQ8TBR7 257 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 CITED4Q96RK1 184 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 NRIP2Q9BQI9 281 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 POLDIP2Q9Y2S7 368 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 AMDHD2Q9Y303 409 aa14.82□□□□□ -0.04
SMC6-206ENST00000446852 GRPP07492 148 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 ABCA11PQ4W5N1 156 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 BEX5Q5H9J7 111 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 ALKAL2Q6UX46 152 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 OR5T2Q8NGG2 359 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 OR11L1Q8NGX0 322 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 RTN4IP1Q8WWV3 396 aaPredicted RBP14.81□□□□□ -0.04
SMC6-206ENST00000446852 GTF3AQ92664 365 aaKnown RBP14.81□□□□□ -0.04
SMC6-206ENST00000446852 PIK3IP1Q96FE7 263 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 RNF126Q9BV68 326 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 RHOFQ9HBH0 211 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 TMEM100Q9NV29 134 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 C1orf123Q9NWV4 160 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 CHD3Q12873 2000 aaKnown RBP14.81□□□□□ -0.04
SMC6-206ENST00000446852 PTPRQQ9UMZ3 2332 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 IGKV1-6A0A0C4DH72 117 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 A0A0D9SG52 128 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 LINC00862A6NCI5 91 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 H0YIZ8 118 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 BET1O15155 118 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 ZNF44P15621 663 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 FABP6P51161 128 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 UCP3P55916 312 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 RBM39Q14498 530 aaKnown RBP14.81□□□□□ -0.04
SMC6-206ENST00000446852 EIF2S3LQ2VIR3 472 aaKnown RBP14.81□□□□□ -0.04
SMC6-206ENST00000446852 Q6ZR03 302 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 POC1AQ8NBT0 407 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 S100PBPQ96BU1 408 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 VRK1Q99986 396 aaPredicted RBP14.81□□□□□ -0.04
SMC6-206ENST00000446852 GSX2Q9BZM3 304 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 BCL2L14Q9BZR8 327 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 NAA60Q9H7X0 242 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 ATP23Q9Y6H3 246 aa14.81□□□□□ -0.04
SMC6-206ENST00000446852 B3GALNT1O75752 331 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms