RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SMIM17P0DL12 118 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 ATP6V0CP27449 155 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 SKP2Q13309 424 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 MICBQ29980 383 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 NHLRC3Q5JS37 347 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 IFITM10A6NMD0 228 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 FGF2P09038 288 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 MDH2P40926 338 aaKnown RBP16.47■□□□□ 0.23
SHANK3-203ENST00000445220 ACAA2P42765 397 aaKnown RBP16.47■□□□□ 0.23
SHANK3-203ENST00000445220 C16orf82Q7Z2V1 217 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 DEFB108BQ8NET1 73 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 OR4B1Q8NGF8 309 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 LRRC61Q9BV99 259 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 DDA1Q9BW61 102 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 FOXQ1Q9C009 403 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 TLNRD1Q9H1K6 362 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 LINC01565O15544 149 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 RHBDL1O75783 438 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 PRSS1P07477 247 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 CSN3P07498 182 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 FAM157BP0CG42 384 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 BRS3P32247 399 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 OR1L4Q8NGR5 311 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 ZNF764Q96H86 408 aaPredicted RBP16.47■□□□□ 0.23
SHANK3-203ENST00000445220 HSPB8Q9UJY1 196 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 F5P12259 2224 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 H3BMH7 237 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 NGFP01138 241 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 POU2F2P09086 479 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 CTLA4P16410 223 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 RCC1P18754 421 aaPredicted RBP16.47■□□□□ 0.23
SHANK3-203ENST00000445220 OR4D11Q8NGI4 311 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 VSIG4Q9Y279 399 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 SOCS1O15524 211 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 HOXD4P09016 255 aaPredicted RBP16.47■□□□□ 0.23
SHANK3-203ENST00000445220 AMER3Q8N944 861 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 CADM4Q8NFZ8 388 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 STARD10Q9Y365 291 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 CCL27Q9Y4X3 112 aa16.47■□□□□ 0.23
SHANK3-203ENST00000445220 MYO7AQ13402 2215 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 MARF1Q9Y4F3 1742 aaKnown RBP16.46■□□□□ 0.23
SHANK3-203ENST00000445220 C5orf52A6NGY3 159 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 RAB29O14966 203 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 PAGE4O60829 102 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 CYB561D1Q8N8Q1 229 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 OR1P1Q8NH06 330 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 WDR13Q9H1Z4 485 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 NCBP2LA6PVI3 153 aaKnown RBP16.46■□□□□ 0.23
SHANK3-203ENST00000445220 TNFSF11O14788 317 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 FCGR3BO75015 233 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 MRPL54Q6P161 138 aaKnown RBP16.46■□□□□ 0.23
SHANK3-203ENST00000445220 H1FOOQ8IZA3 346 aaPredicted RBP16.46■□□□□ 0.23
SHANK3-203ENST00000445220 CPEB3Q8NE35 698 aaKnown RBP16.46■□□□□ 0.23
SHANK3-203ENST00000445220 ICAM5Q9UMF0 924 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 SHISA7A6NL88 538 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 MYBPHQ13203 477 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 OR4F17Q8NGA8 305 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 OR11G2Q8NGC1 345 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 RNF2Q99496 336 aa16.46■□□□□ 0.23
SHANK3-203ENST00000445220 TECRQ9NZ01 308 aaKnown RBP16.46■□□□□ 0.23
SHANK3-203ENST00000445220 PMS2P1A4D2B8 440 aa16.46■□□□□ 0.22
SHANK3-203ENST00000445220 S100A4P26447 101 aaKnown RBP16.46■□□□□ 0.22
SHANK3-203ENST00000445220 COL19A1Q14993 1142 aa16.46■□□□□ 0.22
SHANK3-203ENST00000445220 OR1C1Q15619 314 aa16.46■□□□□ 0.22
SHANK3-203ENST00000445220 Q56UQ5 140 aa16.46■□□□□ 0.22
SHANK3-203ENST00000445220 ALKBH3Q96Q83 286 aaPredicted RBP16.46■□□□□ 0.22
SHANK3-203ENST00000445220 SHROOM3Q8TF72 1996 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 ANKRD34CP0C6C1 535 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 CD82P27701 267 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 CTGFP29279 349 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 OR3A1P47881 315 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 GZMMP51124 257 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 C10orf111Q8N326 155 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 OR2D3Q8NGH3 330 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 UBALD1Q8TB05 177 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 C8orf44Q96CB5 159 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 TRAV8-7A0A075B6U6 113 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 CTXND1A0A1B0GTU2 59 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 BCL2P10415 239 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 NPEPL1Q8NDH3 523 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 ZFP64Q9NPA5 681 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 TTC3P53804 2025 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 GAGE10A6NGK3 116 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 ZXDAP98168 799 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 ZNF141Q15928 474 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 LEMD1Q68G75 181 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 LINC00469Q8N7U9 141 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 HSPB9Q9BQS6 159 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 METTL1Q9UBP6 276 aaKnown RBP16.45■□□□□ 0.22
SHANK3-203ENST00000445220 LOXL2Q9Y4K0 774 aa16.45■□□□□ 0.22
SHANK3-203ENST00000445220 CORTO00230 105 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 APCSP02743 223 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 UBE2L3P68036 154 aaKnown RBP16.44■□□□□ 0.22
SHANK3-203ENST00000445220 DUSP2Q05923 314 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 HYAL1Q12794 435 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 VMA21Q3ZAQ7 101 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 TRAT1Q6PIZ9 186 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 OR1N1Q8NGS0 311 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 FBLIM1Q8WUP2 373 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 TRGV10A0A0A0MS01 117 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms