RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 SPACA1Q9HBV2 294 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 FBLN5Q9UBX5 448 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 SPATA2Q9UM82 520 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 PEX16Q9Y5Y5 336 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 A0A075B6Q4 140 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 MEX3AA1L020 520 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 UBE2QL1A1L167 161 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 METTL21EPA6NDL7 271 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A10PA6NDY2 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A18PA6NE21 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A16PA6NEW6 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A20PA6NIJ5 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A8PA6NJQ4 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A7PA6NKC0 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A22PA8MWA6 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A12PA8MX19 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A5PA8MXJ8 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A23PA8MXZ1 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 K7N7A8 449 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 TMEM127O75204 238 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FOXH1O75593 365 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A15PP0C7V4 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A13PP0C7W8 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A14PP0C7W9 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM90A24PP0C7X0 464 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 ZFP36P26651 326 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 UBE2NLQ5JXB2 153 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 BTN2A1Q7KYR7 527 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 C6orf201Q7Z4U5 140 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 BIVMQ86UB2 503 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM185AQ8N0U4 392 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 OR8H2Q8N162 312 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 PTX4Q96A99 478 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 PHF21AQ96BD5 680 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 DGCR14Q96DF8 476 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 C6orf62Q9GZU0 229 aaPredicted RBP11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 SHARPINQ9H0F6 387 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM234AQ9H0X4 552 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 IFT22Q9H7X7 185 aa11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 RCC2Q9P258 522 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-204ENST00000442842 LOC105371242A0A075B767 164 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 A0A1W2PQ09 198 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 A6NHS1 94 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 KIAA1324LA8MWY0 1029 aaPredicted RBP11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 A8MXK9 166 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 C22orf46C9J442 243 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 MCRIP1C9JLW8 97 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 MGST3O14880 152 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 RGS5O15539 181 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 HPGDSO60760 199 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 MSMBP08118 114 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 FUT3P21217 361 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 LMO1P25800 156 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 CHATP28329 748 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 GZMKP49863 264 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 AESQ08117 197 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 MADCAM1Q13477 382 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM189A2Q15884 450 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 KRBOX4Q5JUW0 171 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 SIGIRRQ6IA17 410 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 IZUMO1Q8IYV9 350 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 DTX3Q8N9I9 347 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 LINC01356Q8N9X3 169 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 OR10R2Q8NGX6 335 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 PLPPR1Q8TBJ4 325 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 ARHGAP5-AS1Q96IT6 56 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 C18orf12Q96KH6 178 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 SULT4A1Q9BR01 284 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 SLIRPQ9GZT3 109 aaKnown RBP11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 SEBOXQ9HB31 216 aaPredicted RBP11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 BATF3Q9NR55 127 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 C19orf12Q9NSK7 152 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 PLEKHJ1Q9NW61 149 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 ETAA1Q9NY74 926 aa11.24□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM25AB3EWG3 89 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM25CB3EWG5 89 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM25GB3EWG6 89 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 B4DSR2 109 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 EIF4EP06730 217 aaKnown RBP11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 P2RX3P56373 397 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 RBM39Q14498 530 aaKnown RBP11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 CD276Q5ZPR3 534 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 SPNS3Q6ZMD2 512 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 Q6ZTK2 550 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 TRAPPC6BQ86SZ2 158 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 GLCCI1Q86VQ1 547 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 CMTM4Q8IZR5 234 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 FAM89BQ8N5H3 189 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 OR5D13Q8NGL4 314 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 MSI2Q96DH6 328 aaKnown RBP11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 RAB3CQ96E17 227 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 PECRQ9BY49 303 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 ZMAT3Q9HA38 289 aaKnown RBP11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 CHMP1AQ9HD42 196 aaPredicted RBP11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 ONECUT1Q9UBC0 465 aa11.23□□□□□ -0.61
TM9SF4-204ENST00000442842 ZNF469Q96JG9 3925 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-204ENST00000442842 MEIKINA0A087WXM9 373 aa11.22□□□□□ -0.61
TM9SF4-204ENST00000442842 FOXI3A8MTJ6 420 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-204ENST00000442842 H3BUI4 141 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms