RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 BCL2L2Q92843 193 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 MARC2Q969Z3 335 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF75AQ96N20 296 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR2J1Q9GZK6 312 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM269A0A1B0GVZ9 245 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 LOC107986453A0A1B0GWG9 222 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM74A7A6NL05 159 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR2F2O95006 317 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 DAOP14920 347 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 GLRXP35754 106 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ATP1B3P54709 279 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ACTBP60709 375 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ACTG1P63261 375 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 PPP1R1AQ13522 171 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR2F1Q13607 317 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM74A3Q4VXF1 159 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 GLT8D1Q68CQ7 371 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM89BQ8N5H3 189 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 C12orf45Q8N5I9 185 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 GVQW1Q8N7I0 195 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 NEU4Q8WWR8 484 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 TECTBQ96PL2 329 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ARL6Q9H0F7 186 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 SLITRK2Q9H156 845 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 UBBP0CG47 229 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 UBCP0CG48 685 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF133P52736 654 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 EFNA4P52798 201 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 DSCR9P59020 149 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 RPS27AP62979 156 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 UBA52P62987 128 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZMYND11Q15326 602 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 KCNMB1Q16558 191 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 RSPO1Q2MKA7 263 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF672Q499Z4 452 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 AADACL3Q5VUY0 350 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR10K2Q6IF99 312 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 PXT1Q8NFP0 134 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR4A4PQ8NGN8 299 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 LYPD6BQ8NI32 183 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 COQ8AQ8NI60 647 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF837Q96EG3 531 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 C18orf12Q96KH6 178 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 RTBDNQ9BSG5 229 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 SOX7Q9BT81 388 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 SLC25A15Q9Y619 301 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 LHFPL6Q9Y693 200 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 NCOA6Q14686 2063 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 A0A0D9SG52 128 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 BTBD17A6NE02 478 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAUP35544 74 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 SNU13P55769 128 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 SRSF3P84103 164 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 SRSF1Q07955 248 aaKnown RBP eCLIP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM122CQ6P4D5 195 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR2W3Q7Z3T1 314 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM185AQ8NFB2 350 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR5AP2Q8NGF4 316 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR52N4Q8NGI2 321 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 NPRL2Q8WTW4 380 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 AIFM2Q9BRQ8 373 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 UQCC2Q9BRT2 126 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 MFFQ9GZY8 342 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 LPAR5Q9H1C0 372 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR52A1Q9UKL2 312 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM96BQ9Y3D0 163 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 DCHS1Q96JQ0 3298 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 GCN1Q92616 2671 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 TEX13DA0A0J9YY54 714 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM238LA0A1B0GVL6 79 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 LY6HO94772 140 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF205O95201 554 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 CRYBA1P05813 215 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 HCKP08631 526 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 CELA3BP08861 270 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF121P58317 390 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 MICBQ29980 383 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 FOXL2NBQ6ZUU3 175 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 RHOUQ7L0Q8 258 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 BPIFCQ8NFQ6 507 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 HS3ST6Q96QI5 342 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 C5orf66Q9H5L9 145 aa6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 CARHSP1Q9Y2V2 147 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZFHX4Q86UP3 3567 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 IGHV2OR16-5A0A0B4J2B6 119 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 IGKV1-9A0A0C4DH69 117 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 C5orf63A6NC05 138 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM235A6NFC5 223 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF878C9JN71 531 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 TEX46H3BTG2 121 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 RAB3DO95716 219 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 NDUFB7P17568 137 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 SPOCK1Q08629 439 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM74A1Q5RGS3 127 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 CFAP77Q6ZQR2 320 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 NKAIN3Q8N8D7 197 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 SLAMF6Q96DU3 332 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR2H1Q9GZK4 316 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 ATG5Q9H1Y0 275 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 CKLFQ9UBR5 152 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms