RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CACNA1AO00555 2505 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 ANKRD20A5PA0PJZ0 165 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 B4DXG7 233 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 K7ENP7 123 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 GGCTO75223 188 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF432O94892 652 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 H2AFZP0C0S5 128 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 GABRG2P18507 467 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 IGHV1-2P23083 117 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 AK4P27144 223 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 HTR1EP28566 365 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 RPL12P30050 165 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 NTSP30990 170 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 IL2RGP31785 369 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 RFC3P40938 356 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 TNFSF9P41273 254 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 SULT1A1P50225 295 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 SULT1A2P50226 295 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 COPZ1P61923 177 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 EMX1Q04741 257 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 PPP1R1AQ13522 171 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 RSU1Q15404 277 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 PARP15Q460N3 678 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 CDNFQ49AH0 187 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 OCIAD2Q56VL3 154 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 TFDP3Q5H9I0 405 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF506Q5JVG8 444 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF620Q6ZNG0 422 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 MBOAT2Q6ZWT7 520 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 MRPL52Q86TS9 123 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 CTAGE3PQ8IX95 158 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 LYG1Q8N1E2 194 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 BIRC8Q96P09 236 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 COL21A1Q96P44 957 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR11A1Q9GZK7 315 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 RPF2Q9H7B2 306 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 ENY2Q9NPA8 101 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 HRASLS2Q9NWW9 162 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 SSR3Q9UNL2 185 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 HSPE1-MOB4S4R3N1 261 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 EFCAB6Q5THR3 1501 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 BCL9O00512 1426 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNFX1Q9P2E3 1918 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 UBR1Q8IWV7 1749 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 MYO5CQ9NQX4 1742 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 ARHGAP35Q9NRY4 1499 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 MYH7P12883 1935 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 MEIKINA0A087WXM9 373 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 EXOC1LA0A1B0GW35 172 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 I3L521 148 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MANBAO00462 879 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MFSD11O43934 449 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 FOXH1O75593 365 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 CLIC3O95833 236 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 PTTG1O95997 202 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 RLN2P04090 185 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF250P15622 560 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 APLNRP35414 380 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 RORCP51449 518 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 HILS1P60008 231 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 RAB8AP61006 207 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 C16orf72Q14CZ0 275 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 HSD17B12Q53GQ0 312 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 PYCR3Q53H96 274 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 TMEM97Q5BJF2 176 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 EPGNQ6UW88 154 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 C12orf54Q6X4T0 127 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF767PQ75MW2 155 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR13C4Q8NGS5 318 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZFP90Q8TF47 636 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MRAP2Q96G30 205 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 RSPO3Q9BXY4 272 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 FGFBP2Q9BYJ0 223 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZBP1Q9H171 429 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 SLC7A10Q9NS82 523 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 PRO0628Q9UI54 55 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MYO5BQ9ULV0 1848 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 OVOS2A0A0J9YW53 1432 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 OVOS2Q6IE36 1432 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MARF1Q9Y4F3 1742 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MED23Q9ULK4 1368 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 SLIT1O75093 1534 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 TET3O43151 1660 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 A0A087WX48 190 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 A0A096LPI6 279 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 C20orf202A1L168 122 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 IFITM10A6NMD0 228 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 FAM220BPB1ANY3 271 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 F6UZH7 168 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 K7ERU9 68 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 SLC17A3O00476 420 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 GNG7O60262 68 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF30P17039 623 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 VHLP40337 213 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 TAS2R43P59537 309 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 LMO4P61968 165 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 BCL2L1Q07817 233 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 GNMTQ14749 295 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF239Q16600 458 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 PRSS8Q16651 343 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms